Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A9601_06791 |
Symbol | hisS |
ID | 4717381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. AS9601 |
Kingdom | Bacteria |
Replicon accession | NC_008816 |
Strand | + |
Start bp | 603778 |
End bp | 605058 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640078392 |
Product | histidyl-tRNA synthetase |
Protein accession | YP_001009072 |
Protein GI | 123968214 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0124] Histidyl-tRNA synthetase |
TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAATAACT TAAAAAACCT AAGAGGAACA GTAGACCTAT TTCCTGATCA ATTAATAAAG TGGCAAAACG TTGAAAAAAT TTTATTAGAG CAGCTCTCTA GAGCATCCAT CAAAGAAATA AGAACACCAA TATTGGAAAT GACCGAATTA TTTATAAGAG GAATTGGTGA AGGAACAGAT GTTGTCAGTA AGGAAATGTA TACATTTCTT GATAGGGGGG AGAGGTCTTG CACTCTAAGA CCTGAAGGAA CAGCCTCAGT CGCACGAGCG TTAATACAAA ACGGAATATC TTCTAATCCT ATTCAAAAAC TTTGGTACAT GGGTCCTATG TTTCGATACG AAAGACCTCA AGCTGGCAGG CAAAGACAGT TTCATCAATT AGGTGTTGAG TTTATAGGAC ATGATTCAGT TAGAAGTGAT GTTGAAATTA TTGCTTTAGC TTGGGATATA TTACGCAAAT TAGGAATAAA AGAACTCAAT CTTGAAATAA ATACGTTAGG TGATACTAAT GACAGATCAA ATTTTCAAAA ATCTTTTTTA AAATGGTTAG AAACAAATAA AGATTCTCTA GATTTAGATT CTCAGAATAG AATTTCTAAA AACCCTTTGA GGATTTTGGA CTCAAAGAAT ATTCAAACTA AAAAAGTTCT TGAAAATGCA CCAAGATTAT TTAATTTTTT ATCTGAAAAA AGTCATAACA GATATTTAGA CTTAAAAAGA CAATTAGAGG TTTTAAAAAT ACCTTATGTA GAAAATTTTA ATCTTGTAAG AGGTTTAGAT TACTACACTC ATACAGCTTT TGAAATTACT AGTGGGGCTT TGGGCTCCCA AGCTACAGTT TGCGGAGGAG GGAGATACGA CGATTTAATA AAACAAATGG GAGGGCCAAA CACTCCTGCA ATTGGTTTCG CTATTGGTTT AGAAAGATTA ATTTTACTCG CAGGAAAAGA GCTTGAAATT CCAAGAAATA CTGATATCTA TATCATTAAT AAAGGCTTAG TTGCTGAATC ATTAGCAATG GATTTATCAA GAAAATTAAG AAATTACGAT TTGTTAGTTG AGTTAGATTT AAGCGGAGCC TCATTCTCTA AGCAATTTAA AAAGGCAAAT AAACTTAAAT CTAAAAGTAT TATTGTTATT GGTGAGGATG AGGCAGTTAA TGGGGAATTT ATTATAAGGC TCTTTGATCA ATCGGGTAAT GGGAATGAAG AGGAGGTTAT ATCTTTTGAG AATGATATTA AATTAGAAAA TTGGATAAAC AATAACTTAC TTGTAAAGTG A
|
Protein sequence | MNNLKNLRGT VDLFPDQLIK WQNVEKILLE QLSRASIKEI RTPILEMTEL FIRGIGEGTD VVSKEMYTFL DRGERSCTLR PEGTASVARA LIQNGISSNP IQKLWYMGPM FRYERPQAGR QRQFHQLGVE FIGHDSVRSD VEIIALAWDI LRKLGIKELN LEINTLGDTN DRSNFQKSFL KWLETNKDSL DLDSQNRISK NPLRILDSKN IQTKKVLENA PRLFNFLSEK SHNRYLDLKR QLEVLKIPYV ENFNLVRGLD YYTHTAFEIT SGALGSQATV CGGGRYDDLI KQMGGPNTPA IGFAIGLERL ILLAGKELEI PRNTDIYIIN KGLVAESLAM DLSRKLRNYD LLVELDLSGA SFSKQFKKAN KLKSKSIIVI GEDEAVNGEF IIRLFDQSGN GNEEEVISFE NDIKLENWIN NNLLVK
|
| |