| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A9601_06541 |
|---|
| Symbol | trpS |
|---|
| ID | 4717356 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. AS9601 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008816 |
|---|
| Strand | - |
|---|
| Start bp | 578118 |
|---|
| End bp | 579134 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 640078367 |
|---|
| Product | tryptophanyl-tRNA synthetase |
|---|
| Protein accession | YP_001009047 |
|---|
| Protein GI | 123968189 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0180] Tryptophanyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00233] tryptophanyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAATA AAAAAAGAAT TCTTTCGGGA GTTCAACCAA CTGGTGATTT ACATATTGGG
AATTGGCTTG GGGCCATAAA TAATTGGGTT GAGCTTCAAG ATCAATATGA AACATTTTTA
TGTGTAGTTG ATTTGCACGC AATAACAGCC TCATATAATC CCAAAGAATT ATCTAAAAAC
ACGATCTCTA CAGCGGCTTT GTACGTCGCT TGTGGTATAG ATCCCAATAT ATGCTCAATT
TTTGTCCAAA GTCAGATTTC AGCGCATTCA GAACTTTGTT GGATATTAAA TTGTATGACC
CCAATAAATT GGATGGAAAG AATGATTCAA TTTAAAGAAA AATCCATACA ACAAGGTAAT
AATGTATCTA TTGGATTATT TGACTATCCA ATACTTATGG CGGCAGACAT CCTTCTTTAT
AATGCTGACT TCGTACCAGT AGGTGAGGAT CAAAAACAAC ATCTTGAACT TGCGAGAGAT
ATTGCACAAC AGAGAATTAA TGCCAGATTT AGTAAGGATA AAAATATTTT AAAGATCCCT
CAACCAATCA TCATGAAGAA TGGTTCAAAA ATAATGAGTT TAATTGATGG TTCAAAAAAG
ATGAGCAAAA GTGATCCCAA TGAGGGCAGT CGCATTAACT TATTAGATCC TCCTGAAATA
ATCACAAAAA AAATTAAAAG AGCAAAAAGT GACAGTTCTG TTGGAATTGA ATTTAACAAC
CCTGAGAGGC CAGAATCTAA AAATCTATTG ATGATTTATT CAATATTATC TGGCAAAGAA
ATTTCTCAAT GTGAAAATGA ATTCTTAGAG ACTGGATGGG GGACATTTAA AAAATTAATT
ACTGAACAAC TTATTGAATC ATTAGAACCT ATTCAGAAAA AATATAAATT ATTAATTAAT
GATCCCTATC AACTAAATAA AATCCTTAAT GAAGGGAAGG AAAAAGCTGA AGATTTAGCG
AATCAGACTT TAAAAAGAGT TAAATCAAAA TTGGGGTTTT TTGAAATGGA GAAATAA
|
|---|
| Protein sequence | MANKKRILSG VQPTGDLHIG NWLGAINNWV ELQDQYETFL CVVDLHAITA SYNPKELSKN
TISTAALYVA CGIDPNICSI FVQSQISAHS ELCWILNCMT PINWMERMIQ FKEKSIQQGN
NVSIGLFDYP ILMAADILLY NADFVPVGED QKQHLELARD IAQQRINARF SKDKNILKIP
QPIIMKNGSK IMSLIDGSKK MSKSDPNEGS RINLLDPPEI ITKKIKRAKS DSSVGIEFNN
PERPESKNLL MIYSILSGKE ISQCENEFLE TGWGTFKKLI TEQLIESLEP IQKKYKLLIN
DPYQLNKILN EGKEKAEDLA NQTLKRVKSK LGFFEMEK
|
|---|
| |