| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A9601_06491 |
|---|
| Symbol | prlC |
|---|
| ID | 4717351 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. AS9601 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008816 |
|---|
| Strand | - |
|---|
| Start bp | 570474 |
|---|
| End bp | 572561 |
|---|
| Gene Length | 2088 bp |
|---|
| Protein Length | 695 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 640078362 |
|---|
| Product | M3 family peptidase |
|---|
| Protein accession | YP_001009042 |
|---|
| Protein GI | 123968184 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0339] Zn-dependent oligopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATACCT CAATTTTTAA ATATGGAGAG TTACCAGAAT TTAAAAAATT TACTCCTGAA
AGCATTAGTA AACAATTTCC CTCAGTATTA GAAAAGATAG CTGAAGAATT TAAAAACATA
GAAAAAAATT TATCTAATTA TTTGATTCAA AATGATTTAA ATTGGGATAA GGTAATAAAT
CCTTTAAATG AAGTAAATGA AATTCTTAGA TGGAGTTGGG GAGTAATAAG TCACCTAAAT
GCTGTAAATA ATTCTGAAAG TTTAAGAGAT ATTTATTCAA AATTTCTTCC AGAGATTATT
AGCTTGAGTA ATAAATTCGG GCAAAGCAAA ATAATTTTCA ATTCTTTAGT CAAGCTTAAA
GAAACAAATA ACTTTGATCA AATTAAAAAC AGAATTTTAG AAAAAGAAAT TCTTGAGATG
CAACATAGAG GTATTTCACT GCAAAAGAAT GATCAAGAAG AATTCAACAA AATTTCAGAA
ACCCTTGGAA AACTATCAAC TGAATTCAGT AACAATGTTC TTGATGCAAC TAACGAATGG
TTTTTAATTT TAAATAAAAA ATCCGAAGTC GATGGTCTTC CTGACCGAGT ACTTGAATTG
ATGGCAATTT CTGCACACAA TCACTTAAAA AAAGATGAAG AAGTTGATAT TAAAAATGGT
CCTTGGAAAT TAAGTCTAGA TATTCCAACT TATACTTCGT TCATGACATA TTCCACAGAG
CGTAATCTTA GAGAAAAGCT TTACAAGGCG TTCGTTAGTA GGGCGTCTCA AGGAGAAAAA
AATAATTCTC AAATCATTGA AGATATATTA TCTCTCAGGA CTAAACAAGC AAATCTTCTC
GGTTATAAAA GTTGGGCAGA ACTAAGTTTG TCAACGAAAA TGGCGAAAGA AATTAAAAAT
GTAGAAAACC TTTTAGAAGA ATTGAGAGAA CCAGCATTCA AAGCTGCAAA AATTGAATTA
GAGACGCTCG ATAAGTTTTC TAAAGCTAAT GGATTTCCAA AATCGCAGAA TATTGAACCA
TGGGATATTA GTTATTGGTC TGAACTTCTT AGAAAGGAAA AGTTTAATTT AGATCAAGAG
TCTTTGAGAC CTTGGTTCCC ACTAAATGAT GTTTTGAAAG GTTTATTTAA ATTAAGTGAG
AAGCTTTTTG AAATTAAAGT AGTTGAGGCG ACTGATGAGG CACCTCTCTG GAATGATGAC
GTTTTATTTT TTAATATCCT TAATAATGAA AATAAAAAAA TTGCATCATT TTACCTAGAT
CCATATTCTA GGCCTGAATC AAAAAGAGGA GGGGCTTGGA TGGATGAATG TTTGAATAAA
AATAATGTTG GCAAAAAGAC TCTCCCTGTA GCTTATCTCG TTTGTAATCA GACCCCACCA
TCAAAAGACA AACCTAGTTT GATGAGTTTT GAAGAAGTTC AGACTCTTTT CCACGAATTT
GGTCATGGTC TTCAACACAT GCTCACTACT GTAAATCTTC CTCAAGCAGC GGGCATTAAC
AACGTTGAGT GGGATGCAGT CGAACTTCCC AGTCAATTTA TGGAAAACTG GTGTTTTCAT
AAAAATACAC TTATGAATAT TGCTAAGCAC TACAAAACAG GAGAAAAATT ATCCGATGAG
AATTTTGAGA AGCTCTTGAA GAATAGAACT TTTAATTGTG GTATGGCTAC TCTTAGACAA
CTACATTTTG CAATTACAGA CCTCAGATTG CACAGTAGTA TTGATAAAAA CGAAGGTAAA
ACAGCAGATG AAATAAGAAG AGAAATTGCA AAACAAACTA CTGTTATTGA ACCAATTCAA
GAAGATCACT TTCTTTGTTG TTTTAGTCAT ATATTTGCAG GCGGATATTC TGCAGGATAC
TACTCTTATA AATGGGCTGA AGTTCTAAGT GCTGATGCTT TTTCAATGTT CGAAGAAGCT
GATCTAGAAA ACTCTGAAGA TTTAAAGCTA ATAGGTAAAA AATTCAAAGA TACTATACTA
AGCTTGGGTG GGAGCTTACC TCCGTTAGAC ATATTCAAAC TATTCAGGGG AAGAGAGCCA
CAAACAGATT CATTGATAAG ACACTTAGGT TTATCTGGAG CTACATAA
|
|---|
| Protein sequence | MDTSIFKYGE LPEFKKFTPE SISKQFPSVL EKIAEEFKNI EKNLSNYLIQ NDLNWDKVIN
PLNEVNEILR WSWGVISHLN AVNNSESLRD IYSKFLPEII SLSNKFGQSK IIFNSLVKLK
ETNNFDQIKN RILEKEILEM QHRGISLQKN DQEEFNKISE TLGKLSTEFS NNVLDATNEW
FLILNKKSEV DGLPDRVLEL MAISAHNHLK KDEEVDIKNG PWKLSLDIPT YTSFMTYSTE
RNLREKLYKA FVSRASQGEK NNSQIIEDIL SLRTKQANLL GYKSWAELSL STKMAKEIKN
VENLLEELRE PAFKAAKIEL ETLDKFSKAN GFPKSQNIEP WDISYWSELL RKEKFNLDQE
SLRPWFPLND VLKGLFKLSE KLFEIKVVEA TDEAPLWNDD VLFFNILNNE NKKIASFYLD
PYSRPESKRG GAWMDECLNK NNVGKKTLPV AYLVCNQTPP SKDKPSLMSF EEVQTLFHEF
GHGLQHMLTT VNLPQAAGIN NVEWDAVELP SQFMENWCFH KNTLMNIAKH YKTGEKLSDE
NFEKLLKNRT FNCGMATLRQ LHFAITDLRL HSSIDKNEGK TADEIRREIA KQTTVIEPIQ
EDHFLCCFSH IFAGGYSAGY YSYKWAEVLS ADAFSMFEEA DLENSEDLKL IGKKFKDTIL
SLGGSLPPLD IFKLFRGREP QTDSLIRHLG LSGAT
|
|---|
| |