| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A9601_06281 |
|---|
| Symbol | trpA |
|---|
| ID | 4717329 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. AS9601 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008816 |
|---|
| Strand | + |
|---|
| Start bp | 548931 |
|---|
| End bp | 549758 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640078341 |
|---|
| Product | tryptophan synthase subunit alpha |
|---|
| Protein accession | YP_001009021 |
|---|
| Protein GI | 161353817 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0159] Tryptophan synthase alpha chain |
|---|
| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATTA ATAAAAATGA ATCTTTATCT AAGGTAGATG AAATGTTTAG TGAGTTAAAA
AATAAAAAAA AATTTGCTTT AATGCCTTTT ATAATGGCTG GGGATCCCAA TATTGAAATA
ACGTCTGAGA TATTATTAAA GTTACAAGAA AATGGAGCTG ACCTTGTTGA ATTAGGCATC
CCGTATAGTG ACCCACTTGC AGATGGTCCT GTTATTCAAT TGGCGGCCTC TCGCGCCTTA
AAGTCAGGTA CTAGCTTAAG AAAAGTAATT AAACTTTTAG AGTCTTTAAA AGGTAAATTA
AATATTCCCA TCATCCTTTT TTCTTACTTG AATCCATTAC TATGTTTTGG CTTTGAAAGG
TTTTGTGAGA TGGCATCTGA TGCTGGAGTT TCTGGACTAA TAGTTCCTGA CCTCCCTTTG
GAGGAAGCTT ATAAATTTTC TAAAATAGTT AGTCACCATT CTATGGACTT AATTTTATTA
GTAGCGCCAA CTACTCCTTT TGAAAGAATG AAACAAATAT CAAATCATAC AAAAGGCTTT
ACTTATTTAG TAAGTGTTAC GGGTGTCACT GGTGAGAGAA ATAAAATGGA AAATAGAGTA
GAAAATCTTA TTGCTAAATT AAAAGATGTA AATAGCAATC CAATTGCTGT TGGTTTTGGA
ATATCAACTC CAGAACACGT TAATAAAGTT CGTGAGTGGG GAGCAGATGG AGTAATTATT
GGGAGTGCAT TTGTAAAAAG AATCTCGAGC TTAGGTGAAA AGGATGTTGT CGATCACGTT
GGTGAGTTTT GTAAAGAAAT GCGTTTAGCT GCGGATCAAA AAAAATAA
|
|---|
| Protein sequence | MQINKNESLS KVDEMFSELK NKKKFALMPF IMAGDPNIEI TSEILLKLQE NGADLVELGI
PYSDPLADGP VIQLAASRAL KSGTSLRKVI KLLESLKGKL NIPIILFSYL NPLLCFGFER
FCEMASDAGV SGLIVPDLPL EEAYKFSKIV SHHSMDLILL VAPTTPFERM KQISNHTKGF
TYLVSVTGVT GERNKMENRV ENLIAKLKDV NSNPIAVGFG ISTPEHVNKV REWGADGVII
GSAFVKRISS LGEKDVVDHV GEFCKEMRLA ADQKK
|
|---|
| |