Gene A9601_06171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA9601_06171 
Symbol 
ID4717317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. AS9601 
KingdomBacteria 
Replicon accessionNC_008816 
Strand
Start bp537944 
End bp539740 
Gene Length1797 bp 
Protein Length598 aa 
Translation table11 
GC content33% 
IMG OID640078329 
Productputative multidrug efflux ABC transporter 
Protein accessionYP_001009010 
Protein GI123968152 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTTTA AAGATTTTAG AAGGATTAAA AAGTTAGGTA AATATTTAAC AAAAGATAAA 
AAAACAATCT ATCTAATCTT GATAGTTTTG TTACCTGTTT CTTTTTCTGG AGCTATTCAA
CCATTATTAG TTGGACAAGC AATTACTATT CTAAAGAAAG AAACTACAGA TGTTTGGCTA
AGTAAAACTT TCTTTGGGCA GTCGATAAAT GCCATTATCG TAACTTTATT TATAACTGTT
TTATTCAGAT TAGTTCTGCA GGGATACCAA ACTTACAATA TCCAAGCAGT TGGACAACGT
TTGACAGCAA GAATAAGAAG AGAACTTTTT GATCATTCAA TATCTTTATC TCTTAAGTAT
CACGATAAAA TGCCTGTGGG GAAATTATTA ACAAGATTAA CAAATGATGT TGATGCTTTA
GCCGAGGTTT TTGGTAGTGG GGCAGTAGGA GTCATTGCTG ACTTCGTTAG TCTGATAGTA
ATTTCTTTGA CAATGCTGTC AATTGATCGG GGGCTTGCCA TTTTATTACT TTTGACTCAA
ATCCCAGTTT CATATTTTAT TATCTGGCTT CAAAAACGTT ACAGAAGAGC CAATTATCAA
GTAAGGGAAG AATTGTCTCA ACTAAACTCT GATTTTCAAG AGAATCTTCA AGGTTTAGAA
GTCGTTCAGA TGTTCAGAAG AGAGGCTTTT AATAGCAAGA AATTTTCCAA AACTGGAGAT
GCTTATAAGA AAGCAGTTAA TGGAACAATA TTTTATGACA GTAGTATTTC AGCGTTTATA
GAATGGATCT CTCTTGCTGC AGTTTCCTTG GTTTTGGCAG TTGGAGGATA TCTTGTTACT
TCTGGAAATA TTGGTTTAGG AACATTAACA ACTTTTATTT TATATTCCCA AAGACTTTTT
GAACCTTTAA GGCAGCTTGC AGAAAGATTT ACTCAAATAC AAGGAGGTTT AACAGCTGTA
GAAAGAATAA ACGAATTATT GGACGAAGAA ATACAGATTA AGGACTCTGC TTCCGCAAAA
CATTTTTTAG AAAATGCTAA AAATGTAAAT AAAAAATTTA AGGGCAAAAT TGAGTTCAAA
AATGTTAATT TTTTCTACAA CGAAGGAGAA CACATTATAA AGAATTTATC TTTCAAGATT
AACCCTGGAG AGCATGTTGC TTTTGTAGGT CCAACTGGTT CAGGTAAGAC AACCATAATA
AGACTATTGT GTAGATTGTA TGAACCTCAA TCGGGTCAAA TTTTAATCGA TGATATAGAT
ATCAAAGATA TTCCTATTGC AACTCTTAGA AATATGTTGG GAGTAGTTTT GCAAGATACC
TTTATCTTTA GTGGAAATGT CGCAGATAAT TTAAAACTGA ATTCGAATCT AGACAATTTT
GTATTAGAAA ATCTTTGTTA CGAATTAGGG TTAGATAATT TGCTAAAAAA ATTACCAGAA
GGTTTGAACA CCTCACTAAG AGAAAGAGGG GGAAATCTCT CTTCTGGAGA GAGACAACTT
CTTTCCGTAG CTCGAGTAGC GATTAGAAAT CCTGTTGTTT TAATAATGGA CGAAGCAACA
GCGTTTATGG ATCCCTCAAC AGAAGCTACT TTGCAGAAAG ATCTTGAGAG AATTCTGTCA
AAAAGAACAG CATTAGTAAT AGCTCATAGA TTAGCAACTA TTGAAAGTTC TGATAAGATT
TTAGTCTTGA AAGGGGGATC ATTAGTTGAG GAGGGAACGC ATAGTGAATT AAGACTTAAA
AAGGGTTTAT ATTTTCAGCT CTCTGAGCTT CAACAAAAGG GATTCGTGAA TTTTTAA
 
Protein sequence
MFFKDFRRIK KLGKYLTKDK KTIYLILIVL LPVSFSGAIQ PLLVGQAITI LKKETTDVWL 
SKTFFGQSIN AIIVTLFITV LFRLVLQGYQ TYNIQAVGQR LTARIRRELF DHSISLSLKY
HDKMPVGKLL TRLTNDVDAL AEVFGSGAVG VIADFVSLIV ISLTMLSIDR GLAILLLLTQ
IPVSYFIIWL QKRYRRANYQ VREELSQLNS DFQENLQGLE VVQMFRREAF NSKKFSKTGD
AYKKAVNGTI FYDSSISAFI EWISLAAVSL VLAVGGYLVT SGNIGLGTLT TFILYSQRLF
EPLRQLAERF TQIQGGLTAV ERINELLDEE IQIKDSASAK HFLENAKNVN KKFKGKIEFK
NVNFFYNEGE HIIKNLSFKI NPGEHVAFVG PTGSGKTTII RLLCRLYEPQ SGQILIDDID
IKDIPIATLR NMLGVVLQDT FIFSGNVADN LKLNSNLDNF VLENLCYELG LDNLLKKLPE
GLNTSLRERG GNLSSGERQL LSVARVAIRN PVVLIMDEAT AFMDPSTEAT LQKDLERILS
KRTALVIAHR LATIESSDKI LVLKGGSLVE EGTHSELRLK KGLYFQLSEL QQKGFVNF