| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A9601_05341 |
|---|
| Symbol | pta |
|---|
| ID | 4717234 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. AS9601 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008816 |
|---|
| Strand | + |
|---|
| Start bp | 464410 |
|---|
| End bp | 465519 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640078248 |
|---|
| Product | phosphotransacetylase domain-containing protein |
|---|
| Protein accession | YP_001008929 |
|---|
| Protein GI | 123968071 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0857] BioD-like N-terminal domain of phosphotransacetylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATA TATTATTAAT CGGCTCATGT GAGCCATTTA GTGGTAAGTC TGCAATGGTT
CTTGGGATAG CAAAAAAACT TTTACAGAAG AAAAAAAAAG TACGCATTGG AAAACCTTTA
GCAACGTGTA TTGAACTTAC AAATCTTCCC TCAATGTCTT ATGAAGGATT AATAGATGAT
GATGTTAAGT TTATTGGATC AACGCTTAAT ATCGAAGAGG AGAATTTAAT TTCTTCAGTA
GGGTTATTGG ATAATATCTC AGCTGAAAAA AGAATCTTCA ATAAAGACTT ACTCCCAGGA
AAAGGTTTTG ATCAGATTCA AGAATTGGTT AATGATGATT TTGAAGGTCT TAATATTTTA
GAGGCAGCCG GAAGTCTTCA TGAGGGTATG ATTTATGGAT TAAGTCTCCC ACAACTAGCT
AAGGATTTAG ATGCGAAAGT TTTAATTGTA AATTTATGGG AAGATTGTAA AAGTGTGGAT
TCATTACTTG ATGCGAAAAA ACAATTAGGT GATAAATTGG CTGGAGTTGT ATTAAATGGA
GTTTTGCCGC AAGAACTCGA AAAAGTAAAA AATGAAATAA TACCCTCTCT TAAAGATCTG
GATATTGAGG TGTTTGGAGT GATGCCTAAA TCCCCACTTC TTAGAAGTGT CACCGTAGGC
GAGCTTGTAA GAAGACTAGA TGCCCAAGTA ATTTGTTGCC CTGAAAAAGA TCAATTGCTT
GTTGAAACAT TAAGCATTGG TGCAATGGGG GTAAATTCTG CAATGGAATT TTTCAGGAGA
AGACGAAATA TGGCTGTAGT TACTGGAGCT GATAGAACTG ATATCCAACT TGCTGCTTTG
GAGGCTTCAA CTCAATGCCT TATTTTAACT GGTTTAGGAG ATCCTTTGTC ACAATTGATT
CATAGAGCGG AGGAATTGGA GGTGCCAATT TTAAAGGTGG AATTAGATAC TCTTTCCTCT
GTGGAAATTA TTGAACAAGC TTTTGGTCAT GTCAGAATAC ATGAATCAAT TAAAGCTTCT
TATGCTATTC AATTAGTTCA AGAGCATGTA AATCTAAAAA GAATTCTCGA AAAGATAGAT
TTTCCCTGCA ATTTTTCAGA TAAATGCTAA
|
|---|
| Protein sequence | MSDILLIGSC EPFSGKSAMV LGIAKKLLQK KKKVRIGKPL ATCIELTNLP SMSYEGLIDD
DVKFIGSTLN IEEENLISSV GLLDNISAEK RIFNKDLLPG KGFDQIQELV NDDFEGLNIL
EAAGSLHEGM IYGLSLPQLA KDLDAKVLIV NLWEDCKSVD SLLDAKKQLG DKLAGVVLNG
VLPQELEKVK NEIIPSLKDL DIEVFGVMPK SPLLRSVTVG ELVRRLDAQV ICCPEKDQLL
VETLSIGAMG VNSAMEFFRR RRNMAVVTGA DRTDIQLAAL EASTQCLILT GLGDPLSQLI
HRAEELEVPI LKVELDTLSS VEIIEQAFGH VRIHESIKAS YAIQLVQEHV NLKRILEKID
FPCNFSDKC
|
|---|
| |