| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A9601_05301 |
|---|
| Symbol | rplS |
|---|
| ID | 4717230 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. AS9601 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008816 |
|---|
| Strand | - |
|---|
| Start bp | 461785 |
|---|
| End bp | 462264 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640078244 |
|---|
| Product | 50S ribosomal protein L19 |
|---|
| Protein accession | YP_001008925 |
|---|
| Protein GI | 123968067 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0335] Ribosomal protein L19 |
|---|
| TIGRFAM ID | [TIGR01024] ribosomal protein L19, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAAA TGGCCAAAGA GAAACAAGAG AAGGATTTAG AAACCGGTAT TAAAGCTGAG
GCATCAGTTG ATGTAGCAGT TGAACAAAAA GAAAAAAATA CGGTTTCTGA GACTAAGCAA
ACCTTAAGCG CATCCAATCT TATTAGGGAA TTTGAGAACG AACAATTAAA AAAAGAATTA
CCAGAAATTT ATGTTGGTGA CACTGTTAAA GTTGGAGTGA AAATTACAGA AGGTAATAAA
GAAAGAGTCC AACCTTATGA AGGCGTTGTC ATAGCAAAAA GACATGGAGG AATTAACCAG
ACTATTACAG TTAGAAGAAT TTTTCAGGGT ATAGGCGTTG AAAGAGTATT TATGCTACAT
AGTCCACAGG TTGCCTCTCT AAAAGTTGAA CGTAGAGGTA AAGTAAGAAG AGCTAAGTTA
TTCTATCTGA GAGATAGAGT AGGAAAAGCT ACTCGCGTTA AACAACGCTT TGATCGATAA
|
|---|
| Protein sequence | MTKMAKEKQE KDLETGIKAE ASVDVAVEQK EKNTVSETKQ TLSASNLIRE FENEQLKKEL
PEIYVGDTVK VGVKITEGNK ERVQPYEGVV IAKRHGGINQ TITVRRIFQG IGVERVFMLH
SPQVASLKVE RRGKVRRAKL FYLRDRVGKA TRVKQRFDR
|
|---|
| |