Gene A9601_05271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA9601_05271 
SymbolnhaP 
ID4717225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. AS9601 
KingdomBacteria 
Replicon accessionNC_008816 
Strand
Start bp458552 
End bp459757 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content38% 
IMG OID640078239 
ProductCPA1 family Na+/H+ antiporter 
Protein accessionYP_001008922 
Protein GI123968064 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0377759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCCTG AAAGGCTTGG ATTACTTTGG GGGATAACTG TATTTGCAGG CGCTTGCGCT 
CGATTATTTT CTTCTTTTAC AGGATTCCCA AGTGTTGTTA TTTTATTGCT TTCTGGATTA
TTAATTGGAA GATCAGGACT GGGACTTGTT GAGCCTTTAG ATCTCGGGCA AGGGCTTGAA
ACTATTGTGG GGCTTTTGGT CTGTTTGGTT CTTTTTGAAG GGGGATTAAA TTTAAAACTT
CCTGAGGGGA ATATAAGAAA TACTGTTTTA AAAATTTCAT TGGTAAGACT TTTTATTTCA
TTATCAGCTG GAATTTTCAT TGCTCATTGG CTGGCTGGCC TCTCATGGCA AGTCGCAGGA
ATATATAGTG CCATAGTTCT AGCTACTGGA CCAACAGTTG TCTCTCCATT AGTGGAACAA
ATAAAATTAG CTTCCCCACT CTCGGAAGTT TTAAAAGCTG AGGGGTTGCT GCTTGAACCA
ATTGGTGCAG TACTAGCATT ACTGCTTTTA GAATTGACTT TAGGGGATCT TCGTGGGATT
AACGATGTAT TTATAGCATT AATGCAAAGA TTAGGAGGAG GAGTTTTAAT CGGATTAAAT
GCAGGATGGT TATTATCAGA AATTTTAAAA AAAATAAAAA ATGAAGCCTC ATTTGGTATA
GAGCTTCAAG TTACCCTTGG ATTTATTTTT CTTGTGTATG GAATTTGTGA ATATTTTTTA
CCAGAATCAG GCTTGCCGGC TTCAGTCGCG TCAGGTTTTA TTGTAGGCAA AAGAGAAGTT
ATAGATAAGG AGAGATTGGA TAATCTAATA GGTGAATTAG CTCAATTAGC AATAACAGTT
CTTTTCCCTC TTTTGGCTGC TGACGTTTCT TGGGGTGAAT TAAGTCCGCT AGGGTGGGGA
GGGTTTGTTT GCGTTTTTAT GTTGATGGTA ATTGTTCGCC CTATCTCTAT CTGGATAGCA
ACAATGGGGA GAGACTTGAA CTTAAAAGAA AAAATATTTT TAGCCTGGTT AGCCCCAAGA
GGTATTGTTA CTGCAGCTGT AGCTTCTCTT TTTTCTATCA GATTAGAGCA GGCTGGTATC
CTTGGGGCTG GCCGTCTTCA AGGTTTAGTT TTTCTTACTA TTTTGATGAC GGTAGGAATA
CAAGGACTTT CAGCTAAACC TTTGGTGAAT AGACTTAAAT TAGGCCAAAA AAATAATTTT
GATTGA
 
Protein sequence
MTPERLGLLW GITVFAGACA RLFSSFTGFP SVVILLLSGL LIGRSGLGLV EPLDLGQGLE 
TIVGLLVCLV LFEGGLNLKL PEGNIRNTVL KISLVRLFIS LSAGIFIAHW LAGLSWQVAG
IYSAIVLATG PTVVSPLVEQ IKLASPLSEV LKAEGLLLEP IGAVLALLLL ELTLGDLRGI
NDVFIALMQR LGGGVLIGLN AGWLLSEILK KIKNEASFGI ELQVTLGFIF LVYGICEYFL
PESGLPASVA SGFIVGKREV IDKERLDNLI GELAQLAITV LFPLLAADVS WGELSPLGWG
GFVCVFMLMV IVRPISIWIA TMGRDLNLKE KIFLAWLAPR GIVTAAVASL FSIRLEQAGI
LGAGRLQGLV FLTILMTVGI QGLSAKPLVN RLKLGQKNNF D