| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A9601_05101 |
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| Symbol | ispD |
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| ID | 4717208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. AS9601 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008816 |
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| Strand | + |
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| Start bp | 444615 |
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| End bp | 445286 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640078222 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_001008905 |
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| Protein GI | 123968047 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.319587 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCACTTTT TAATACCAGC TGCAGGGAGT GGTAGCAGAA TGAAAGCTGG AAAAAATAAA
TTACTTATTG ATTTAGAGGG AGAGTCTTTG ATTTATTGGA CGCTTAAATC CGTACTTTCT
GCAAACTCAA CAAACTGGGT TGGAATAATT GGGCAACCGA AAGATAAAAA TTTATTATTA
AATTCAGCAA AGGATTTTGC CCAAAAAGTT CATTGGATTA ATGGTGGTGA CACCAGACAA
CAGTCAGTTT TTAATGGTTT AGAAGCGTTA CCAAAAGATG CTAAAAAAGT TTTAATACAT
GATGGTGCTA GATGTCTAAT TAATCCTGAA TTGATAGACC TTTGTGCCAA GCAATTAGAT
GAAAATGAAG CTGTAATTTT GGCTACTAAG GTAACTGACA CAATAAAGAT TGTTGATAAA
GAAGGTTTTA TTAAAGAAAC ACCAGATAGA AATTATTTAT GGGCAGCGCA AACTCCTCAG
GGCTTTTTAG TAGATAGATT AAAAAAAGCT CATAAGATGG CAATTGATAA AAAATGGAAA
GTCACAGATG ATGCCTCACT ATTCGAAATA CTTAATTGGA AAGTGAAGAT TATTGAAGGA
ACTTATTCAA ATATAAAAAT TACATCCCCT ATAGATTTGA AAATAGCAAA ACTTTTTGTG
AAGAACCCCT AG
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| Protein sequence | MHFLIPAAGS GSRMKAGKNK LLIDLEGESL IYWTLKSVLS ANSTNWVGII GQPKDKNLLL
NSAKDFAQKV HWINGGDTRQ QSVFNGLEAL PKDAKKVLIH DGARCLINPE LIDLCAKQLD
ENEAVILATK VTDTIKIVDK EGFIKETPDR NYLWAAQTPQ GFLVDRLKKA HKMAIDKKWK
VTDDASLFEI LNWKVKIIEG TYSNIKITSP IDLKIAKLFV KNP
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