Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A9601_05071 |
Symbol | groEL |
ID | 4717205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. AS9601 |
Kingdom | Bacteria |
Replicon accession | NC_008816 |
Strand | - |
Start bp | 441717 |
End bp | 443462 |
Gene Length | 1746 bp |
Protein Length | 581 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640078219 |
Product | chaperonin GroEL |
Protein accession | YP_001008902 |
Protein GI | 123968044 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAAAC AGTTAAATTT TTCTAATGAA TCAAGAGAAG CGCTAGAAAA AGGTGTGAAT TTTGTAGCTA ATGCAGTAAA GGTTACTATT GGGCCAAAAG CAAAAAACGT TGTAATAGAA AAGAAATTTG GTTCGCCGGA TATAGTAAGA GATGGATCTA CAGTTGCTAA AGAGATCGAG ATTGAAAACC CTATTGCTAA TTTAGGTGCG AAATTAATAG AACAAGTCGC ATCCAAGACA AAAGAGAGTG CTGGTGATGG GACAACAACA GCAACCATTT TGACTCAGAA GATGGTTCAG GAGGGATTAA AAAATATTGC TTCTGGTGCC AACCCTATGG AGTTAAAAAA AGGTATGGAA GCAGGCCTAG CTTTTGTCTT AGAAAAATTA AGTTCCAAAA GTATTTCATT AAGTGGTTCT GACATCCAAA AAGTTGCAAC AGTTAGTGCT GGAGGTGATG AAGAAATTGG ATCTATAATT TCGAAAGCAA TGGATATTGT TACTTCAGAT GGTGTAATAA CTGTTGAAGA ATCTCAATCA TTAGAAACAG AATTAGATAT AACTGAAGGA ATGTCTTTTG ATAGAGGTTA TAGTTCTCCA TATTTCGTAA CAGACCAAGA AAGACAAGTT TGTGAACTTG AAAACCCTAA AATATTAATA ACTGATCAAA AAATCTCAAC TTTAGTTGAT CTAGTTCCAA TACTTGAAGA AATTCAAAAG GCGGGCTCAC CTTTTCTAAT TCTTGCTGAA GATATTGAAG GAGAGGCTTT AACTACTCTG GTTTTGAATA AGAATAGTGG GGTTTTAAAT GTAGCTTCCG TGAGAGCTCC TTTATTTGGT GAGAGAAGAA AAGCTGCCCT TGAAGATATT GCAATTCTTA CAGGGGCTAA GTTAATTAGC GAAGATAAAT CGATGACACT TGATAAAGTA TCTATTAATG ATTTAGGCAA AGCAAAAAAA ATAACTATCA CAAAGGATAA AACTACAATT GTTGCCTTCG AAGACACTAA AGATTTAGTT GAAGCGCGAG TAGAGAAATT AAAGAGAGAA GTTAACATAA CTGAATCTGA GTATGATCAG GACAAAATCA ATGAAAGGAT AGCCAAACTA GCCGGAGGAG TAGCTCTTAT CAAAGTAGGA GCTGCTACAG AAACAGAGAT GAAATATAAA AAGTTGAGAA TTGAAGATTC CCTTAATGCT ACGAAAGCTG CTATTGAAGA GGGTGTTGTT TCTGGAGGAG GACAAACTTT AATTGAAATA TCAGATGACC TTTTAAATTT AAGTGAAACA TCTTCAGATG ATTTAAGAAC AGGGATAAAT ATAGTTAAAG AAGCCCTTTT GGAACCTACC AAACAAATAG CAAAAAATGC TGGTTTTAAT GGTGATGTAG TTGTCGCTGA AATTCAAAGG CTTAACAAAG GCTTTAATGC TAATTCAGGA CAATATGAGG ATTTAAAAGA TTCAGGAATA TTAGATCCAA CCAAAGTAAT AAGATTAGCT CTTCAAGATT CAGTATCTAT TGCAGCTATG CTCCTCACAA CAGAAGTTGC GATGGCAGAC ATTCCAGAGC CTGAAGCCGC GGCCCCTGGA GGACCAGGTG GAGATCCAAT GGGAGGAATG GGTGGCATGG GAATGCCAGG AATGGGTGGC ATGGGAATGC CGGGTATGGG TGGCATGGGA ATGCCGGGTA TGGGTGGCAT GGGAATGCCA GGAATGGGTG GCATGGGAAT GCCGGGTATG ATGTAA
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Protein sequence | MAKQLNFSNE SREALEKGVN FVANAVKVTI GPKAKNVVIE KKFGSPDIVR DGSTVAKEIE IENPIANLGA KLIEQVASKT KESAGDGTTT ATILTQKMVQ EGLKNIASGA NPMELKKGME AGLAFVLEKL SSKSISLSGS DIQKVATVSA GGDEEIGSII SKAMDIVTSD GVITVEESQS LETELDITEG MSFDRGYSSP YFVTDQERQV CELENPKILI TDQKISTLVD LVPILEEIQK AGSPFLILAE DIEGEALTTL VLNKNSGVLN VASVRAPLFG ERRKAALEDI AILTGAKLIS EDKSMTLDKV SINDLGKAKK ITITKDKTTI VAFEDTKDLV EARVEKLKRE VNITESEYDQ DKINERIAKL AGGVALIKVG AATETEMKYK KLRIEDSLNA TKAAIEEGVV SGGGQTLIEI SDDLLNLSET SSDDLRTGIN IVKEALLEPT KQIAKNAGFN GDVVVAEIQR LNKGFNANSG QYEDLKDSGI LDPTKVIRLA LQDSVSIAAM LLTTEVAMAD IPEPEAAAPG GPGGDPMGGM GGMGMPGMGG MGMPGMGGMG MPGMGGMGMP GMGGMGMPGM M
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