| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A9601_04551 |
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| Symbol | pdhC |
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| ID | 4717153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. AS9601 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008816 |
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| Strand | + |
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| Start bp | 394884 |
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| End bp | 396251 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640078167 |
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| Product | branched-chain alpha-keto acid dehydrogenase subunit E2 |
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| Protein accession | YP_001008850 |
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| Protein GI | 123967992 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01349] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.230997 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCACG AAATATTCAT GCCTGCCTTG AGTTCTACCA TGACGGAGGG CAAGATTGTG
GAATGGTTGA AAAATCCAGG AGATAAAGTT GCAAGAGGTG AATCTGTCTT GGTTGTTGAA
TCTGACAAGG CAGATATGGA TGTTGAATCT TTTCAAGATG GATACCTTGC AGCTGTTTTA
ATGCCTGCTG GCAGCACTGC ACCAGTAGGA GAGACTATCG GTTTAATTGT AGAAAATGAG
GATGAGATAG CTTCTGTTCA AGAACAAAAT AAAGGAAATC AACCCGAAGT TTCTAGTTCG
GATCAACTTG AATTGGTAAG CAATAAAACT GAAGAAAAAC CTTTGGTTCA AACTGAAATT
GTTGAAAAAC AAGAAAAAGA AGTTGTATTA ATGAGTGAAA AGGCAGCCCC ATCTTCTAAT
AGTGATCAAA TAAATGCTGC TACGAGTAAT GTTTCTTCGA GGGTGATTGC ATCTCCAAGA
GCTAAAAAAC TTGCCTCTCA AATGGGTGTT GATTTAGCAA AGGTTCATGG ATCAGGACCT
CATGGAAGGA TTCAAGCCGA TGATATTTTA AAAGCTAATG GCCAACCAGT CTCTATACCA
TGGATAGGCG AAGGTGGTTC TCCTGCAAGT ATCCCTGGTG TAAATTTGGG GGTTGAAAGT
AAACCAGAAG CTTCAGGAAA TAGTTTTGGT AATCCCGGAG AAACAGTTCA ATTTAATACT
CTTCAAAAAG CGGTAAATAA AAATATGGAA TCTAGTTTAG ATGTGCCATG TTTTAGAGTG
GGTTACTCCA TCAACACAGA TAAATTAGAT AATTTTTATA AAAAAGTAAA ACAGAATGGA
GTGACTATGA CTGCTTTACT AGTTAAAGCA GTTGCTAAGA CACTAAAGAA ACACCCTCAA
GTTAACTCAA GTTTTTCAGA AAATGGAATT TCTTATCCAG AAAATATAAA TATTGCTGTT
GCTGTAGCGA TGGAAGATGG TGGACTAATA ACTCCAGTTT TAAAAGAACC ATGCAATACT
GATTTATTTG AATTGTCTAG GGAATGGAAA GATCTCGTAA AAAGATCAAG ATCAAAACAA
TTAGAACCCG ATGAATACTC AACGGGAACC TTCACTTTAT CTAACCTTGG GATGTTTGGA
GTTGATAGAT TTGACGCAAT TCTTCCTCCA GGTACCGGTG CTATTTTAGC CATAGCATCA
TCGAAACCAA CCGTTGTTGC TAATAGTGAT GGTTCAATAT CTGTTAAAAA AATAATGCAA
GTAAATCTAA CGGCTGATCA TAGAGTGATC TATGGAGCTG ATGGAGCTTC ATTCTTAAAA
GACTTGGCTT CCCTAATTCA AGATGAGCCA GAGACTCTTG TCTCCTAA
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| Protein sequence | MSHEIFMPAL SSTMTEGKIV EWLKNPGDKV ARGESVLVVE SDKADMDVES FQDGYLAAVL
MPAGSTAPVG ETIGLIVENE DEIASVQEQN KGNQPEVSSS DQLELVSNKT EEKPLVQTEI
VEKQEKEVVL MSEKAAPSSN SDQINAATSN VSSRVIASPR AKKLASQMGV DLAKVHGSGP
HGRIQADDIL KANGQPVSIP WIGEGGSPAS IPGVNLGVES KPEASGNSFG NPGETVQFNT
LQKAVNKNME SSLDVPCFRV GYSINTDKLD NFYKKVKQNG VTMTALLVKA VAKTLKKHPQ
VNSSFSENGI SYPENINIAV AVAMEDGGLI TPVLKEPCNT DLFELSREWK DLVKRSRSKQ
LEPDEYSTGT FTLSNLGMFG VDRFDAILPP GTGAILAIAS SKPTVVANSD GSISVKKIMQ
VNLTADHRVI YGADGASFLK DLASLIQDEP ETLVS
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