| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A9601_03071 |
|---|
| Symbol | degT |
|---|
| ID | 4716994 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. AS9601 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008816 |
|---|
| Strand | + |
|---|
| Start bp | 283335 |
|---|
| End bp | 284540 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 640078009 |
|---|
| Product | putative pleiotropic regulatory protein |
|---|
| Protein accession | YP_001008702 |
|---|
| Protein GI | 123967844 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.743429 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATAC CTCCATTTAC TTTAGAAAGG CAGTTCCAAG AAATTGGCTC TGAAATTGAG
AGTGAGGTTT CTAAAGTTTT AAAAGGGGGC CAGTATATTG GAGGACAAGT AATTGCCAAA
TTTGAGGAGA GTTTTTCAAA TCTGATTGGT GTTGAAAATA CTATTGGATG TAATAGTGGA
ACTGATGCTT TAGTATTAGC TCTGCGCGCC TTAAATATTG GTGTGGGTGA TGAAGTTATT
ACTTCATCTT TTAGCTTTTT TGCAACTGCA GAGGCTATTA GTGCAGTTGG CGCTAATCCT
GTTTTGGTGG ATATAGATCC AGAAACTTAT CTCATTAATA CTGAACTAAT AGAACAAGAA
ATAAATCCTA ATACAAAGGC AATTATGCCA GTTCATCTAT TTGGTAATGC AGTGAATATG
ACCTTAATAA AATCTTTGGC AAAGAAATAT GACTTAAAAG TAATTGAAGA TTGTGCTCAG
GCAACATGCA CAATGTGGGA AACTTCCAAA GTTGGTAGTA TCGGTGATAT AGGCTGTTTT
AGCTTTTTCC CTACTAAAAA TTTAGGAGCT GCTGGAGATG GTGGAGCAGT AACAACTTCA
GATAAGGAGA TTGCAAAAAA AATTAGAGAA CTGGCTGTTC ATGGCAGCCC AATAAGATAT
CACCATACCC AAATTGGATA TAACAGCAGA CTTGATACCA TTCAAGCTGC CATATTAAAC
ATTAAAATTA AATATATTTC TAAGTGGATT AATTATCGCC AAAAAATTGC TAATAATTAT
CTTGATTTAT TAGAAAAAAA TCCATTTATA AGTTTTCCAA AAATTAGTTC TGATTCAATT
TCCCATTCTT GGAATCAATT TGTAATCAAA TTAAGAAACG ATGAATATTC TTTAAATGAA
GATTTTTCAA ATTTATTTGA TACTGATTGC AAAAAATACT ATTCCTTAAG GAATTTGGTA
AAACAACAAC TTTTCGAAAA AGGTATTAAT TCAATTATTT ATTATCCAAT TCCAATACAC
GCACAAATAG CTTACAAAAA TAAAAATTTT TCTAGAACAA AACTCATTAA TACAGAGAGA
ATTTGTACTG AAGTTCTTAG TCTGCCAATG TTTCCTGAAA TTTCTTATGA AGAGCAAGTT
TATGTAGCAG AAAATCTAAA TAAAGTTTTA AAGAATTGTA TAGAGGAAAT TCAAATTTCA
GCATAA
|
|---|
| Protein sequence | MQIPPFTLER QFQEIGSEIE SEVSKVLKGG QYIGGQVIAK FEESFSNLIG VENTIGCNSG
TDALVLALRA LNIGVGDEVI TSSFSFFATA EAISAVGANP VLVDIDPETY LINTELIEQE
INPNTKAIMP VHLFGNAVNM TLIKSLAKKY DLKVIEDCAQ ATCTMWETSK VGSIGDIGCF
SFFPTKNLGA AGDGGAVTTS DKEIAKKIRE LAVHGSPIRY HHTQIGYNSR LDTIQAAILN
IKIKYISKWI NYRQKIANNY LDLLEKNPFI SFPKISSDSI SHSWNQFVIK LRNDEYSLNE
DFSNLFDTDC KKYYSLRNLV KQQLFEKGIN SIIYYPIPIH AQIAYKNKNF SRTKLINTER
ICTEVLSLPM FPEISYEEQV YVAENLNKVL KNCIEEIQIS A
|
|---|
| |