| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A9601_02861 |
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| Symbol | lytB |
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| ID | 4716972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. AS9601 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008816 |
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| Strand | + |
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| Start bp | 264180 |
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| End bp | 265376 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640077987 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_001008681 |
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| Protein GI | 123967823 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.287033 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATACTC AAGCTTTTAG AAGATCTCTT CATCATTCTG ATAGATACAA TAGAAGGGGT
TTCGATTCTC CAACAAAAAG AGCTCAAGCG TTAGAAGAAG CTTACCAAAG TGATTTGATA
AGTTCTATCA GAGATAATGG TTTTACTTAT ACTAAAGGCA GACTAAATAT AAAGTTGGCC
CAAGCCTTCG GTTTCTGTTG GGGAGTTGAA AGAGCTGTAG CAATGGCTTA TGAAACCAGA
AGACATTACC CTAATGAGAA TATTTGGATA ACAAACGAAA TAATTCATAA TCCCTCGGTT
AATGATCATT TAAGAAAAAT GAATGTGAAA TTCATTTCAG CTAAAAATGG AATCAAAGAT
TTTTCTTTAG TTTCTAATGG AGATGTTGTT ATACTTCCTG CTTTTGGAGC GACTGTTCAA
GAAATGAAAC TCTTACATGA GAAAGGTTGT CATATTATTG ATACAACATG TCCATGGGTT
TCTAAGGTTT GGCATACGGT TGAAAAACAT AAAAAACATG TTTTCACATC TATAATTCAT
GGAAAATTTA AGCATGAAGA GACTCTTGCT ACAAGTTCAT TTGCAGGTAA ATATTTAGTT
GTACTTGATC TAGAAGAAGC AAACTACGTA TCTGAATACA TTCTGGGGAA AGGAAATAGA
AATGAGTTTA TGAATAAATT CTCTAAAGCT TTTTCTAATG GATTTGATCC TGATAAAGAT
TTAGATAGAG TGGGTGTTGC AAATCAGACA ACTATGCTTA AGAGCGAGAC TGAGGAAATT
GGTAAGGTCT TTGAAAGGAC GATGTTAAAA AAATTTGGGC CAGAAAACTT AAATAGTCAC
TTCTTAGCTT TTAATACTAT TTGTGATGCA ACTGAAGAAA GACAAGATGC AATGTTCTCT
TTGGTTGATG AAGACCTTGA TATTTTAGTA GTTATTGGAG GCTTCAATTC TTCCAATACT
ACTCACTTAC AGGAAATAGC AATTACTAAA AATATTTCTT CTTTTCATAT TGATACGCCT
GAGAGAATAT CAGTTAAAGA AAACTCAATA TTTCACAAGC CATTAGGATC AGAATTAGAA
CTTAAAAAAA ATTTTCTACC TAGTGGAAAA ATTAATGTTG GAATTACCTC AGGTGCTTCC
ACTCCTGATA AGGTCGTGGC AGATGTTATT GAAAAGTTAA TTGATATTGC TTCCTGA
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| Protein sequence | MDTQAFRRSL HHSDRYNRRG FDSPTKRAQA LEEAYQSDLI SSIRDNGFTY TKGRLNIKLA
QAFGFCWGVE RAVAMAYETR RHYPNENIWI TNEIIHNPSV NDHLRKMNVK FISAKNGIKD
FSLVSNGDVV ILPAFGATVQ EMKLLHEKGC HIIDTTCPWV SKVWHTVEKH KKHVFTSIIH
GKFKHEETLA TSSFAGKYLV VLDLEEANYV SEYILGKGNR NEFMNKFSKA FSNGFDPDKD
LDRVGVANQT TMLKSETEEI GKVFERTMLK KFGPENLNSH FLAFNTICDA TEERQDAMFS
LVDEDLDILV VIGGFNSSNT THLQEIAITK NISSFHIDTP ERISVKENSI FHKPLGSELE
LKKNFLPSGK INVGITSGAS TPDKVVADVI EKLIDIAS
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