Gene A9601_02781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA9601_02781 
SymbolleuC 
ID4716963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. AS9601 
KingdomBacteria 
Replicon accessionNC_008816 
Strand
Start bp255305 
End bp256711 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content37% 
IMG OID640077978 
Productisopropylmalate isomerase large subunit 
Protein accessionYP_001008673 
Protein GI123967815 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0065] 3-isopropylmalate dehydratase large subunit 
TIGRFAM ID[TIGR00170] 3-isopropylmalate dehydratase, large subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTCAAG ATACCTTATT TGATAAAGTT TGGGATTTAC ACAAAGTTTC AAGACTTCCA 
GGTGGATCCG ATCAAATATT AATTGGTCTT CACCTTATCC ATGAAGTTAC AAGTCCTCAA
GCATTTGGCG CTTTAAAAGA CAAAAACTTA AAAGTTAAAT TCCCTGATAG AACTGTTGCT
ACCGTTGATC ATATTGTGCC CACAGACAAT CAGAGCAGGC CTTTCAAAGA TAATCTCGCT
GAACAGATGA TTGAAACACT TGAGAAGAAC TGCTTAGAGC ATAAAATAAG ATTTTTTAAT
ATTGGTAGTG GTAATCAAGG AATAGTTCAT GTAGTAGCAC CAGAATTAGG GCTTACTCAG
CCAGGGATGA CAATCGCTTG CGGAGATTCT CATACTTCAA CTCATGGAGC TTTTGGGTCA
ATTGCTTTTG GGATAGGTAC AAGTCAAGTA AGAGACGTTC TTGCTACCCA AACCATAGCC
ATGAACAAAT TGAAAGTAAG GCAGATTTGG TGTGATAATA AATTATCAAA GGGTGTTTTT
GCTAAGGATT TAGTACTTCA TATCATTAAT GAACTTGGTG TAAAAGCAGG AGTAGGTTTC
GCATATGAAT TCGCAGGACC TGCTATAGAT GAATTATCAA TGGAAGAAAG GATGACGATA
TGCAATATGT CTATTGAAGG AGGAGCAAGA TGCGGTTACA TCAATCCTGA TGAAAAAACA
TTTAGTTATA TTAAAGATAA ATTATGTGCT CCTAAAAATG AGTATTGGGA TAAAGCACTA
ACATGGTGGA AATCATTAAA AAGCGATGAA AATTCAATTT ATGATGATGT AATTAAATTA
GATGCTTCTA AAGTGGAGCC AACCGTAACC TGGGGGATTA CTCCTGGCCA AAGTATAAGC
ATTAATCAAC AAATCCCTCT TTTAGATGAC TTGTCCCCAA ATGATAAATT AGTTGCAAAA
GAGGCTTATG AATATATGAG TTTCAAGCCA GGGCAATATA TCAAAGATAC TCCTGTTGAT
GTTTGTTTCA TAGGTAGCTG CACAAATGGA AGAATCAGTG ACTTAAGAGT TGCAGCTAGA
GTATTAAAAA ACAAAAAAGT ATCTAAGAAT GTTAAAGCAT TTGTAGTACC AGGTTCAGAA
AAAGTGGCAA CTGAAGCAAA ACAAGAAGGT CTTGATGAGA TATTTAAGGA TTCTGGATTT
CAATGGAGAG AGCCTGGCTG CTCAATGTGT TTAGCAATGA ATTCAGATAA GCTAATAGGT
AATCAAGTTA GTGCTAGTTC TAGTAATAGA AATTTCAAGG GTAGGCAAGG ATCTCCCAGT
GGGAGAACAC TGCTCATGAG TCCAGCAATG GTTGCTGCTG CTGCAATTAA TGGCAAAGTT
AGTGACGTTA GAGAATTTAT CAACTGA
 
Protein sequence
MSQDTLFDKV WDLHKVSRLP GGSDQILIGL HLIHEVTSPQ AFGALKDKNL KVKFPDRTVA 
TVDHIVPTDN QSRPFKDNLA EQMIETLEKN CLEHKIRFFN IGSGNQGIVH VVAPELGLTQ
PGMTIACGDS HTSTHGAFGS IAFGIGTSQV RDVLATQTIA MNKLKVRQIW CDNKLSKGVF
AKDLVLHIIN ELGVKAGVGF AYEFAGPAID ELSMEERMTI CNMSIEGGAR CGYINPDEKT
FSYIKDKLCA PKNEYWDKAL TWWKSLKSDE NSIYDDVIKL DASKVEPTVT WGITPGQSIS
INQQIPLLDD LSPNDKLVAK EAYEYMSFKP GQYIKDTPVD VCFIGSCTNG RISDLRVAAR
VLKNKKVSKN VKAFVVPGSE KVATEAKQEG LDEIFKDSGF QWREPGCSMC LAMNSDKLIG
NQVSASSSNR NFKGRQGSPS GRTLLMSPAM VAAAAINGKV SDVREFIN