Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A9601_02181 |
Symbol | rnhA |
ID | 4716902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. AS9601 |
Kingdom | Bacteria |
Replicon accession | NC_008816 |
Strand | - |
Start bp | 204081 |
End bp | 204800 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640077917 |
Product | ribonuclease HI |
Protein accession | YP_001008613 |
Protein GI | 123967755 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0328] Ribonuclease HI |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATAGTG ATAGTATTGC GATTGAAGCC GCAACCGATG GAGCCTGCAG CGGTAATCCA GGCCCAGGTG GTTGGGGCGG TTTAATAATT TTTGACGATA ACAGCGAATT AGAAATAGGT GGGTCCGAGC AAAATACTAC TAATAATAGA ATGGAACTCA CGGCGGCTAT AAAAACTCTT GAGAAATTAA AAACCTACAA ATTAAAAGAG AACTTTAAAC TAAGAACTGA TAGTAAATAT GTCATAGAGG GTTATACAAA ATGGATTATT AATTGGAAGA AAAATGGATG GAAAACAAGT TCAGGAAAAC CAGTTCAAAA TCTTGATCTA TGGCAAAAAA TTGATCAATT AAGAATTAAT GGCCTAATAA TGGAATATGT TAAAGGTCAT AGCGGGGATA AACAAAATGA TAGGGTTGAT AAAATTGCAA CTAATTACAG CAAAGGTATA TCTATAGAAA GTAACTTAAA AAAAGTAGAA TACTCAGTTG ATTTTTTTGA AAAAAATGCA CCTGCAGAAA TTCAGAAATT ATTTTCCCGC AATGAATTAA TTCAAAAATT TGCAGAAAAA AAATACCTGT TAAGTTCACC TGAACTAGAC ACCTTATTAG GTGACGAAAA CCACTTAAAG ATAAAACAAT ATTCACTTTT TGAATGGCGT AATTGGATAT TGATTCCTAA AGATAAAAAA TATTGGATAA TAGAAAAAAA AGAAGCCTAA
|
Protein sequence | MNSDSIAIEA ATDGACSGNP GPGGWGGLII FDDNSELEIG GSEQNTTNNR MELTAAIKTL EKLKTYKLKE NFKLRTDSKY VIEGYTKWII NWKKNGWKTS SGKPVQNLDL WQKIDQLRIN GLIMEYVKGH SGDKQNDRVD KIATNYSKGI SIESNLKKVE YSVDFFEKNA PAEIQKLFSR NELIQKFAEK KYLLSSPELD TLLGDENHLK IKQYSLFEWR NWILIPKDKK YWIIEKKEA
|
| |