Gene A9601_02181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA9601_02181 
SymbolrnhA 
ID4716902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. AS9601 
KingdomBacteria 
Replicon accessionNC_008816 
Strand
Start bp204081 
End bp204800 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content32% 
IMG OID640077917 
Productribonuclease HI 
Protein accessionYP_001008613 
Protein GI123967755 
COG category[L] Replication, recombination and repair 
COG ID[COG0328] Ribonuclease HI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAGTG ATAGTATTGC GATTGAAGCC GCAACCGATG GAGCCTGCAG CGGTAATCCA 
GGCCCAGGTG GTTGGGGCGG TTTAATAATT TTTGACGATA ACAGCGAATT AGAAATAGGT
GGGTCCGAGC AAAATACTAC TAATAATAGA ATGGAACTCA CGGCGGCTAT AAAAACTCTT
GAGAAATTAA AAACCTACAA ATTAAAAGAG AACTTTAAAC TAAGAACTGA TAGTAAATAT
GTCATAGAGG GTTATACAAA ATGGATTATT AATTGGAAGA AAAATGGATG GAAAACAAGT
TCAGGAAAAC CAGTTCAAAA TCTTGATCTA TGGCAAAAAA TTGATCAATT AAGAATTAAT
GGCCTAATAA TGGAATATGT TAAAGGTCAT AGCGGGGATA AACAAAATGA TAGGGTTGAT
AAAATTGCAA CTAATTACAG CAAAGGTATA TCTATAGAAA GTAACTTAAA AAAAGTAGAA
TACTCAGTTG ATTTTTTTGA AAAAAATGCA CCTGCAGAAA TTCAGAAATT ATTTTCCCGC
AATGAATTAA TTCAAAAATT TGCAGAAAAA AAATACCTGT TAAGTTCACC TGAACTAGAC
ACCTTATTAG GTGACGAAAA CCACTTAAAG ATAAAACAAT ATTCACTTTT TGAATGGCGT
AATTGGATAT TGATTCCTAA AGATAAAAAA TATTGGATAA TAGAAAAAAA AGAAGCCTAA
 
Protein sequence
MNSDSIAIEA ATDGACSGNP GPGGWGGLII FDDNSELEIG GSEQNTTNNR MELTAAIKTL 
EKLKTYKLKE NFKLRTDSKY VIEGYTKWII NWKKNGWKTS SGKPVQNLDL WQKIDQLRIN
GLIMEYVKGH SGDKQNDRVD KIATNYSKGI SIESNLKKVE YSVDFFEKNA PAEIQKLFSR
NELIQKFAEK KYLLSSPELD TLLGDENHLK IKQYSLFEWR NWILIPKDKK YWIIEKKEA