Gene A9601_01981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA9601_01981 
SymbolprfB 
ID4716882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. AS9601 
KingdomBacteria 
Replicon accessionNC_008816 
Strand
Start bp183362 
End bp184426 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content35% 
IMG OID640077897 
Productpeptide chain release factor 2 
Protein accessionYP_001008593 
Protein GI123967735 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0513147 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAGGA TTGTCTTTGA CGTTCCAAGA TTAAAAGCGA AAAGGAAAGA GTTAGAGCAA 
ATTTCTGCTC AGCCTGAATT TTGGGATAAT CAAGAAGAAG CTAAAAAGCA AATGTTAATC
CTTGATGATG TCAAAGCACA ACTCGAATTG TTAGATAAAT GGAAAACTTT TATTTCTGAT
GCTAATGCCT CTCTTGAGCT TTATTCTCTA GAACCCGAAG AGGAAATGAT TTTAGAATCG
CAGCTGGGAT TAAAGAAATT AAGAGAGAAT TTGGATAAAT GGGAATTTGA GAGATTGTTA
TGTGGTGAAT ACGATAAGGA AGGAGCAGTA GTTTCTATTA ACGCAGGTGC GGGAGGAACA
GATGCGCAGG ATTGGGTAGA GATATTATTA AGAATGTACT CAAGATGGGC CGATAATAAT
CAAATGAGCC TTGTCATTAA TGAATTATCT CAAGGAGAAG AAGCTGGTAT TAAAAGTGTA
ACGTTCGAAA TTGAAGGAAA ATATGCATAT GGCTATCTGC AACATGAAAA AGGAACTCAT
AGATTAGTAA GAATTTCTCC TTTTAATGCC AATGGCAAAA GACAAACCAG CTTTGCTGGG
GTAGAGGTTA TGCCAAAATT AGATGATAAT ATTTCACTTG ATATACCTGA AAAAGATTTA
GAAATTACAA CGAGTAGATC CGGTGGAGCT GGAGGACAAA ATGTTAATAA AGTAGAAACA
GCAGTGAGAA TTGTTCATTT GCCTTCAGGA ATTTCAGTAA GATGTACTCA AGAAAGATCT
CAATTACAAA ATAAAGAAAA AGCTATGTTA CTTTTAAAGT CTAAACTATT AGTGATTGCT
AAAGAACAAC GAGCTGCTGA AGTCGCTGAT ATTAAAGGTG ATATTGTGGA AGCTGCATGG
GGCAATCAAA TAAGAAATTA TGTTTTCCAT CCCTATCAAA TGGTAAAAGA TCTTAGGACT
ATGCAGGAGA CTAACGAGTT AGATAGTGTT TTAGATGGTG GACTTGACCC ATTTATTCAT
GAATTATTAC GTATGAATAT TTCTTCTAAT GAATCTATTG AATAA
 
Protein sequence
MLRIVFDVPR LKAKRKELEQ ISAQPEFWDN QEEAKKQMLI LDDVKAQLEL LDKWKTFISD 
ANASLELYSL EPEEEMILES QLGLKKLREN LDKWEFERLL CGEYDKEGAV VSINAGAGGT
DAQDWVEILL RMYSRWADNN QMSLVINELS QGEEAGIKSV TFEIEGKYAY GYLQHEKGTH
RLVRISPFNA NGKRQTSFAG VEVMPKLDDN ISLDIPEKDL EITTSRSGGA GGQNVNKVET
AVRIVHLPSG ISVRCTQERS QLQNKEKAML LLKSKLLVIA KEQRAAEVAD IKGDIVEAAW
GNQIRNYVFH PYQMVKDLRT MQETNELDSV LDGGLDPFIH ELLRMNISSN ESIE