Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A9601_01981 |
Symbol | prfB |
ID | 4716882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. AS9601 |
Kingdom | Bacteria |
Replicon accession | NC_008816 |
Strand | + |
Start bp | 183362 |
End bp | 184426 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640077897 |
Product | peptide chain release factor 2 |
Protein accession | YP_001008593 |
Protein GI | 123967735 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1186] Protein chain release factor B |
TIGRFAM ID | [TIGR00020] peptide chain release factor 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0513147 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCAGGA TTGTCTTTGA CGTTCCAAGA TTAAAAGCGA AAAGGAAAGA GTTAGAGCAA ATTTCTGCTC AGCCTGAATT TTGGGATAAT CAAGAAGAAG CTAAAAAGCA AATGTTAATC CTTGATGATG TCAAAGCACA ACTCGAATTG TTAGATAAAT GGAAAACTTT TATTTCTGAT GCTAATGCCT CTCTTGAGCT TTATTCTCTA GAACCCGAAG AGGAAATGAT TTTAGAATCG CAGCTGGGAT TAAAGAAATT AAGAGAGAAT TTGGATAAAT GGGAATTTGA GAGATTGTTA TGTGGTGAAT ACGATAAGGA AGGAGCAGTA GTTTCTATTA ACGCAGGTGC GGGAGGAACA GATGCGCAGG ATTGGGTAGA GATATTATTA AGAATGTACT CAAGATGGGC CGATAATAAT CAAATGAGCC TTGTCATTAA TGAATTATCT CAAGGAGAAG AAGCTGGTAT TAAAAGTGTA ACGTTCGAAA TTGAAGGAAA ATATGCATAT GGCTATCTGC AACATGAAAA AGGAACTCAT AGATTAGTAA GAATTTCTCC TTTTAATGCC AATGGCAAAA GACAAACCAG CTTTGCTGGG GTAGAGGTTA TGCCAAAATT AGATGATAAT ATTTCACTTG ATATACCTGA AAAAGATTTA GAAATTACAA CGAGTAGATC CGGTGGAGCT GGAGGACAAA ATGTTAATAA AGTAGAAACA GCAGTGAGAA TTGTTCATTT GCCTTCAGGA ATTTCAGTAA GATGTACTCA AGAAAGATCT CAATTACAAA ATAAAGAAAA AGCTATGTTA CTTTTAAAGT CTAAACTATT AGTGATTGCT AAAGAACAAC GAGCTGCTGA AGTCGCTGAT ATTAAAGGTG ATATTGTGGA AGCTGCATGG GGCAATCAAA TAAGAAATTA TGTTTTCCAT CCCTATCAAA TGGTAAAAGA TCTTAGGACT ATGCAGGAGA CTAACGAGTT AGATAGTGTT TTAGATGGTG GACTTGACCC ATTTATTCAT GAATTATTAC GTATGAATAT TTCTTCTAAT GAATCTATTG AATAA
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Protein sequence | MLRIVFDVPR LKAKRKELEQ ISAQPEFWDN QEEAKKQMLI LDDVKAQLEL LDKWKTFISD ANASLELYSL EPEEEMILES QLGLKKLREN LDKWEFERLL CGEYDKEGAV VSINAGAGGT DAQDWVEILL RMYSRWADNN QMSLVINELS QGEEAGIKSV TFEIEGKYAY GYLQHEKGTH RLVRISPFNA NGKRQTSFAG VEVMPKLDDN ISLDIPEKDL EITTSRSGGA GGQNVNKVET AVRIVHLPSG ISVRCTQERS QLQNKEKAML LLKSKLLVIA KEQRAAEVAD IKGDIVEAAW GNQIRNYVFH PYQMVKDLRT MQETNELDSV LDGGLDPFIH ELLRMNISSN ESIE
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