| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A9601_01931 |
|---|
| Symbol | menC |
|---|
| ID | 4716877 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. AS9601 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008816 |
|---|
| Strand | - |
|---|
| Start bp | 178658 |
|---|
| End bp | 179623 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 640077892 |
|---|
| Product | putative O-succinylbenzoate synthase |
|---|
| Protein accession | YP_001008588 |
|---|
| Protein GI | 123967730 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTAA TATTTCAAAA AAAATCTTAT AGCTTTAAGT TATCGGAAAA AGTAGAAAAT
TCTAAAACCA ATTACCATAC AAAATCGGGT TGGATAATTA AATTAATAAG GAATGATAAA
AAAATAGGGT TTGGAGAAGT TTCACCGCTA TATAAAAAAG ACTTAAAAAA GTGTGCGAAA
GAACTAGATA TGATCCCTGA ATATATAGAG GAATTTAATT TATCTGAGCA AATAAATATT
TTTCACCCAT GTATTCAATC TGCAATAAAT TCTGCATTAG CTGAGATCAA TGGAAAAATA
ATTTTTAAAG AAAACTACTA CTTTGATGAA ATTGGTAAAA CAGCCATATT GTTAAATCAT
GAAAATGTAG TTTCAGATCT AAATAAAATT AAAAAAAGAC AATCTGATAT TGGAAAATCA
TTAACCATAA AATGGAAAGT AGCATTAAAA AATAATCAAG AGGAAGAAGC AAGTTTAGAA
GAAATTTTAA GCCAAATAGG CAATAATATT AAGTTAAGAA TAGATGCTAA TGGTTCTTGG
GGAAGAGAGA TAGCTAATAG ATGGGCTGAT ATTTTGAAGG ATAACAAAAA TGTAGATTGG
TTAGAACAAC CTCTCTGTGT TGATGATATT GATGGACTGA CAGAACTAAA CAAAAAAATC
CCTATAGCCT TAGACGAATC ACTTTTAAAA TTTCCAAATT TGATTAATGA GTGGAAAGGT
TGGCAAATTA GAAGGCCTTC TCAAGAAAAT AATCCAGTTA ATCTTTTAAG AGAATTAGAA
AATAAAAAAG CTTTAATATC TATAAGTACC TCATTTGAAA CTGGTATAGG GAAGAGATGG
CTTTATCATT TATCGTCTCT ACAATTACAA GGACCAACTC CAAAAGTTCC TGGTTTAGCA
ATGAATAAAT TCCCTAATTC GTTTCTATTT TTAAATGAAG CAAAAAAGAT ATGGGATCAA
CTATGA
|
|---|
| Protein sequence | MNLIFQKKSY SFKLSEKVEN SKTNYHTKSG WIIKLIRNDK KIGFGEVSPL YKKDLKKCAK
ELDMIPEYIE EFNLSEQINI FHPCIQSAIN SALAEINGKI IFKENYYFDE IGKTAILLNH
ENVVSDLNKI KKRQSDIGKS LTIKWKVALK NNQEEEASLE EILSQIGNNI KLRIDANGSW
GREIANRWAD ILKDNKNVDW LEQPLCVDDI DGLTELNKKI PIALDESLLK FPNLINEWKG
WQIRRPSQEN NPVNLLRELE NKKALISIST SFETGIGKRW LYHLSSLQLQ GPTPKVPGLA
MNKFPNSFLF LNEAKKIWDQ L
|
|---|
| |