Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A9601_01711 |
Symbol | csgD |
ID | 4716855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. AS9601 |
Kingdom | Bacteria |
Replicon accession | NC_008816 |
Strand | + |
Start bp | 161374 |
End bp | 161652 |
Gene Length | 279 bp |
Protein Length | 92 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640077870 |
Product | LuxR family regulatory protein |
Protein accession | YP_001008566 |
Protein GI | 123967708 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAATGG TTGAAGAAGA AGTAAACAAC ATTGATATGA TGGGTCTCTC AGCAAGAGAG ATGGAAATCA TTGATCTCGT AGCTGATGGA CTTACAAATC AAGAAATTGC GGTAAAACTT ACTATTAGTA AAAGAACTGT TGATAATCAT GTAAGTAATA TGTTTACAAA AACTGGTTCT AAAAACAGAG TTGCACTTTT GAATTGGGCA ATGGACAACG GCAAGATTTG TAGAGATGGA TTTAATTGTT GTACACTCCC AGACTCTGAT CAAGATTAG
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Protein sequence | MQMVEEEVNN IDMMGLSARE MEIIDLVADG LTNQEIAVKL TISKRTVDNH VSNMFTKTGS KNRVALLNWA MDNGKICRDG FNCCTLPDSD QD
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