| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A9601_01661 |
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| Symbol | ndhF |
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| ID | 4716850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. AS9601 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008816 |
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| Strand | + |
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| Start bp | 154504 |
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| End bp | 156516 |
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| Gene Length | 2013 bp |
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| Protein Length | 670 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640077865 |
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| Product | NAD(P)H-quinone oxidoreductase subunit F |
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| Protein accession | YP_001008561 |
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| Protein GI | 123967703 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACAAG CTTCAGAAAT TGCCTGGTTA ATCCCCGTTT TTCCACTAAT TGGAGCAGTG
CTTTCTGGCT TAGGACTAAT AAGCATTAAC AAGAAAATTA ATAATTCAAG AGAAATAGTT
TCTGTAGGTC TGATTTCTTT CGTTGGGATT TCTGCGGTAA TTAGTTATAA AGCTTTAATT
GAACAAGTTA ATGGTTATCA ATCAGTAGAA AAATTATTTG TATGGGCCAA TGCAGGGGAT
TTTACAATTC CAATGGGATT TGTCCTTGAT CCTTTGGGGA GTGTAATGCT TGCGTTAGTA
ACTACAATAA CTTTGCTGGT AATGATTTAC TCTCATGGTT ACATGGCGCA TGACAAAGGA
TATGTCAGAT TTTTTACATA TTTAGCATTA TTTAGTAGTT CAATGATGGG ATTGATAGTT
AGTCCGAATT TATTAGAAAT TTATGTTTTT TGGGAATTGG TTGGGATGTG TTCTTACTTA
TTAGTTGGTT TTTGGTACGA CAGGGATGGC GCTGCACACG CTGCACAAAA AGCATTTGTT
GTTAATAGAG TGGGAGATTT TGGTTTATTA CTAGGAATTC TTGGCCTATT TTGGGCTACA
AATAGTTTTG ATTTTAATGA AATAGCTACT GGAATTTCTC AATCGATATC TGACCATTCG
ATACCTATTT GGGCTGCTTT ATTACTTTGT TTTTTAGTTT TTTTAGGGCC AATGGCTAAA
TCCGCTCAGT TTCCTCTTCA TGTGTGGTTG CCTGATGCGA TGGAAGGTCC TACACCCATT
TCTGCACTTA TCCATGCTGC AACAATGGTT GCAGCAGGAA TCTTTCTTGT AGCAAGACTT
CAACCTTTGT ATTCAATATT CCCCTCTATT CAGTTCATTA TTGCTTTAGT TGGTACCATT
ACTTGTTTTT TAGGAGCCTC TATAGCTTTG ACACAAATGG ATTTAAAAAA AGGTTTAGCA
TATAGCACAG TTTCTCAGCT TGGGTATATG ATGCTCGCAA TGGGTTGTGG AGCACCAGTT
GCAGGAATTT TTCATTTAGT AACTCATGCT TGCTTTAAAG CAATGCTATT TTTGGGATCT
GGTTCAGTAA TACATGCTAT GGAAGAAGTA GTTGGTCATC AGCCTGTATT AGCTCAAGAT
ATGAGATTAA TGGGCGGTTT AAGAAAAAAA ATGCCATACA CATCAACAAC ATTTTTAATA
GGTTGTGTAG CAATTAGTGG AATTCCCCCA CTGGCAGGTT TTTGGAGTAA AGACGAGATA
CTCGGAAATG CTTTTATATC ATTTCCAGCT TTTTGGTTCG TAGGACTTTT AACAGCTGGT
ATGACTGCTT TTTATATGTT TAGGCTTTAT TTCTTGACAT TTGAAGGAGA TTTCAGAGGG
GATAATAAAG AATTGCAAAA ACAGCTTCTA ATAGCCTCTA AAACAAACCT AGATGAAGAA
AATGAAGAAG AGCATGAAGA ACATGGCTCT ATCCATGAGT CACCCTGGTC AATGACATTT
CCCTTAGTAT TTCTAGCTGT ACCGTCGGTA ATAATTGGTT TTATGGGACT TCCATGGGAT
AGCAAAATTG CAAATTTACT AGATCCTGAA GAAGCAGAGA CTGCTGCAAA AGCCTTCGAA
TTTAAAGAAT TTTTGCCTTT AGCAATTGCC TCGGTACTTA TCGCATCAGC TGGCATCATT
ATTGCTTATC AGGCATATTT TGTGAAAAAA ATTAATTTAT CAGTTTTATT TGCCGAAAAG
TTTCCTAGCA TTAATCGATT TTTATCCAAC AAATGGTATC TAGATGATAT TAATGAAAAA
CTTTTTGTTA AGGGTAGTAG GAAACTTGCT AAAGAAGTTT TAGAGGTTGA TTCTAAGGTT
GTTGATGGCG TCGTTAATCT TACTGGACTT GTAACTTTAG GAAGTGGAGA AGGTTTAAAA
TATTTTGAGA CTGGTAGGGC TCAATTTTAT GCGCTTATTG TTTTTGGAGG AGTCATTTTA
CTAGTTGCTA TATTTGGTTT TCAATCTCCT TAA
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| Protein sequence | MPQASEIAWL IPVFPLIGAV LSGLGLISIN KKINNSREIV SVGLISFVGI SAVISYKALI
EQVNGYQSVE KLFVWANAGD FTIPMGFVLD PLGSVMLALV TTITLLVMIY SHGYMAHDKG
YVRFFTYLAL FSSSMMGLIV SPNLLEIYVF WELVGMCSYL LVGFWYDRDG AAHAAQKAFV
VNRVGDFGLL LGILGLFWAT NSFDFNEIAT GISQSISDHS IPIWAALLLC FLVFLGPMAK
SAQFPLHVWL PDAMEGPTPI SALIHAATMV AAGIFLVARL QPLYSIFPSI QFIIALVGTI
TCFLGASIAL TQMDLKKGLA YSTVSQLGYM MLAMGCGAPV AGIFHLVTHA CFKAMLFLGS
GSVIHAMEEV VGHQPVLAQD MRLMGGLRKK MPYTSTTFLI GCVAISGIPP LAGFWSKDEI
LGNAFISFPA FWFVGLLTAG MTAFYMFRLY FLTFEGDFRG DNKELQKQLL IASKTNLDEE
NEEEHEEHGS IHESPWSMTF PLVFLAVPSV IIGFMGLPWD SKIANLLDPE EAETAAKAFE
FKEFLPLAIA SVLIASAGII IAYQAYFVKK INLSVLFAEK FPSINRFLSN KWYLDDINEK
LFVKGSRKLA KEVLEVDSKV VDGVVNLTGL VTLGSGEGLK YFETGRAQFY ALIVFGGVIL
LVAIFGFQSP
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