Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A9601_01311 |
Symbol | hemD |
ID | 4716814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. AS9601 |
Kingdom | Bacteria |
Replicon accession | NC_008816 |
Strand | + |
Start bp | 124764 |
End bp | 125561 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640077829 |
Product | putative uroporphyrinogen III synthase |
Protein accession | YP_001008526 |
Protein GI | 123967668 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1587] Uroporphyrinogen-III synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAAAAG TTGATCTACC CCTTGATCAA AGAAATATAA TTATTACTCG ATCAAAAGAA GGGATATTGG ATATAAAAAA GATATTCATA AGCAAGGGCG CTAATGTATT TGATTTACCT GCAATAAGTA TTGGTGATCC AGATGATTTG AATCCTCTTG ACGAAGCATT AAATCAAATA AATGATTTTC ATTGGATTAT TTTTTCCAGT AGTAATGGGA TCAAATTTGT GGATAAAAGA CTTAGATACT TTAATAGTTC ATTAAAAGAA TGTTCTAAAA AAACAAAAAT CGCCGTAGTC GGAGAAAAAA CCTCAAAAAC TCTTGATGAT TTTGGGATTA AGGCTGATTT CATACCTCCA GAATTTGTTG CTGAAAGTTT AATTGATAAT TTCCCAGTAT CTGGTTATGG ACTTCGAGTT TTTGTACCAA GAGTTCAAAC AGGTGGTAGG GATTTCATTG CAGATCAATT TAGAAAGGCT GGTTCTCGTG TATTTGAGGT TGCTGCATAT GAGACTAGAT GTCCTGAATC AATTCCGGAA GAAACAATTG ATATTATTTC TAATCGAAAA GTTGATGCAA TTATTTTCTC AAGTGGTAAA ACCGTAGTAA ATGCTGCTTT TTTACTAGAA AAAAATCTTG GTAAAAAATG GTTAGAATAT TTTGATCAAA TTAAGTTATT AACTATTGGA CCTCAGACAA CAAAAATATG TAACAAGATT TTTGGAAGAT TTGATAGTCA GGCACAAAAA TATACTTTTG AAGGACTACT AGATGTAGCA ATTAATATTT TTAGTTAG
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Protein sequence | MPKVDLPLDQ RNIIITRSKE GILDIKKIFI SKGANVFDLP AISIGDPDDL NPLDEALNQI NDFHWIIFSS SNGIKFVDKR LRYFNSSLKE CSKKTKIAVV GEKTSKTLDD FGIKADFIPP EFVAESLIDN FPVSGYGLRV FVPRVQTGGR DFIADQFRKA GSRVFEVAAY ETRCPESIPE ETIDIISNRK VDAIIFSSGK TVVNAAFLLE KNLGKKWLEY FDQIKLLTIG PQTTKICNKI FGRFDSQAQK YTFEGLLDVA INIFS
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