Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A9601_00691 |
Symbol | smc |
ID | 4716751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. AS9601 |
Kingdom | Bacteria |
Replicon accession | NC_008816 |
Strand | + |
Start bp | 70731 |
End bp | 74321 |
Gene Length | 3591 bp |
Protein Length | 1196 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 640077766 |
Product | SMC ATPase superfamily chromosome segregation protein |
Protein accession | YP_001008464 |
Protein GI | 123967606 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1196] Chromosome segregation ATPases |
TIGRFAM ID | [TIGR02169] chromosome segregation protein SMC, primarily archaeal type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAGATTGG TACATATCAA TCAGGTCGAG TTTGAAAATT TTAAATCTTT TGGGGGAAAT GTAAAAATAC CTCTTGAAGA AGGTTTTACG GTGGTTACGG GTCCTAACGG TTCTGGGAAA AGTAATATTT TAGATGGAAT TTTATTTTGT TTAGGTCTAG CTAATAGTAG AGGTATGAGG GCTGAAAGAT TACCTGATCT AATAAATAAC TCCAAAGTTA AAGAGGGTAA GTCATCAGAA ACATCTGTAT CGGTAAAATT TAATATTCAA GATTGGTCTC CCAGAGAGGA CCTTCCGCCT TTGGAACTAG AAGAAGAAGA AATCGCCCTT AATAAAGGTC AAAAAGAATG GTTAGTTTCT AGAAAATTAA GGCTTATGCC AGGTGGTTCT TATGCTTCTA CTTATACTTC TGATGGAAAA CAATGTACCT TGCAACAAAT ACAGAGAATA TTAAGAGATA TCAGTGTTGA TCCTGAGGGC AGCAATGTTG TTATGCAGGG TGATGTAACA AGAATAGTAT CAATGAATAA TAAGGAGAGG AGAAATCTTA TTGATGAATT AGCAGGAGTA GCACTTTTTG ATACAAGAAT AGAACAAACT AATGCAAAAT TAAATGACGT TTTCGAAAGA CAAGAAAGAT GTGAAATTTT AGAAAATGAA TTGCAATCTA GTAAAAATAA GCTTGAAAAA GAATGTGAAA AAGCAAAGCG ATATAAAGAG TTAAAGGCAA AACTATTACA AATAATGGAA TTAGAGAAAG TTCTTATTTA TGAAAAACAA GTTAAGCATG TTGAATCTAT AGAAAAAAAA GAAAGTGAAA TTGAAAAAAA TAAAATCTTA TTTAATAAAG AAAAAGAATC TATTAGTAAA GAAATATCAG TTTTAGAAGA TGCTTTGAAA ATACTTGTTG ATGAGCTTAA GGAGAAAGGA GAGGATAAAT TGATAAAAGT GAATTCTGAT ATTGGAAGTA TTAATTCTAG CTTGAGAGAA CTTGATAGGA TATCAAGTCT GAATAAAGAA GAAGGTATTA AATTACAAAA ACAGAGAGAT GAAATTGCAA TTTCTAAGAG GAATATTGAG TCAGAAAAGA TGAGACAAGA AAATTTCGAT GATAATTTTT TAAATCAATT GAACTTTCAA ATTGATGATC TCACTTTAAA ACACAAACTA TCTAGAAAAA AACTTTCTGA TGCGGCTGGA GAATCTGGAG AATTCTCAAA ACAAAGTATC AAATTAAACG CTGAGCTTGA AAGTATAAAA AATCAAATTA ATCCTTTAGA AATAAAAAAA AGGAAACTTG AAGAAGAAAC GATTCAAAAT AATATTCAAA AAGATGAGAT ATTGTCACAG ATCGAATCCT TAGACTTAGA AAAGCAGAAA CTTTTTCAGG GAAATCAAAG AAAAAAAGAG ACATCCGATA CAAAGAATAA AAACTTGGCA AGTAATAGCG CAGAAATTCA TTCTTTAAAA AATGAAATCG ATTTATTAAT TAAAACTAAA TCAAGGCTAA ATAACGAGCA ATTAAGGCTT GAAAAGGATT TATCTAGATT CGAAAGCAGG AAGGAAGCTT TAAACGAATC TAGAGGTTCA TATGCTCTCA GAATTCTCTT AGAGGCAGGC TTAGAGGGTA TACATGGTTA TGTAGCTCAA CTTGGAGAGG TTAGTGAGAA AAATAGATAT GCATTAGAAA TTGCTGCTGG AAATAGGTTA GGACAAATTG TTGTTGATAA TGATCATATT GCTGCAAAAG CAATTGAAAT TCTTAAAAAG AAGAAAGCGG GAAGATTAAC TTTTTTACCT TTAAATAGAA TTAAAAGTCA AAAAAAGAAT TATGCAATTT CAAGATTTGA AAATAACAGG GAGAATGGAT TTATTGATAA AGCTATTAAT CTAATTACTT TTGATGAAGT TTATTCAGAT GTTTTTCGAT ATGTTTTTGG AGATACTTTG GTTTTTTCAG ACTTATCCTC AGCTAGGTTA TCTATACAAA AAAATAGGTT GGTTACCTTA AGTGGTGAAT TATTAGAAGC AAGTGGTGCT ATTACAGGAG GCAGTAAGTT AAATAAAGAT TTGGCTTATA GGTTTGGAAT TAATAATGAT AATGATGATT CCAGTCCTAT AAAAGAAAGA TTATTAGTTA TCGAAGAAGC TTTAAAAGAG TCAAATAATG ATTTGATACT AAAAAATAAT AGACTTAGTA TTTTGAATTC TAACCGCAGT CAAATAATTG AGGATTGGGC CTCATTTAAT AAAGAAATTG AAGTAAATCA AGATTCTCTT AAAGCTGTCT TGCAAAGAAT TGAGGATTGT AAATCGAGAT TAAATAAACT TGATACTGCT AATAATTTAT TAGTTAAAGA GTTAGGTCAT TTAAAAAATC AATTGAAGCC TTATCACGAT AAGTTTGATC AACTACAAAC CATTCAAAAG GCAAATTATG AAAAAAATCA AAAATCATCA TTAATAGCTT TTAATGACGA TTTTAATAAT CTTGATAAAA AACTTGAATT ACTTATTAAA GAGAGAAATA CATTATTAGA TAAAAAGAAT CAATTCGCTT TAAATAAAGA GCGTATCAAT AATTCATTAA AAATTACTTT ACTACAAGAA AAAAACTTGC AGGAATCTAT TAAACAACTC GCAATTGCTC ATAGTGAATG GATAGAAAAA AGGGATCAAT TTAAAAAAGA GCTTTCAGAT CTCGATAATC AAAAAAATTC TCTAGAGAAG AATTTAGGTT TATTGAGAAG GAAAAGAGAT GAATTAAACT CTTCAATTTC AAATAAAAGG CAAGAATATA ATAACTATCT GTTAAAGCTT GAATATCTTG AAAGGGATAT GCATTCCCTC AAAGAAGAGA TGAGGAGCGA GAAAATAAAA TTAGAAAATT ATAAAAAAGA TCTACCTAAT CCTTCCCCGG AGTTTGGAGA ATATGAAGGG AAGGGTCTTG AATCTTTGCA ATCAGAAATT TCGATTATAA ATGCAAAACT AGAAAGCTTA GAACCTGTCA ATATGTTAGC TCTTGATGAA CTAGAAGAAT TAATTGAGAG ATTAAATGGT TTGCGAGAAA AATTAGAAAT TCTATCTAAT GAAAGATCTG AATTATTGCT GAGAATAGAA ACTGTATCTA CGATGCGTCA AGAAGCTTTT ATGCAAGCAT TTACAGAAGT TGATAGACAT TTTAGAGAAA TTTTTGCAAA TTTATCTGAT GGAGATGGAT TTCTTCAACT TGAAAATCCT AATTCTCCTT TAGAAGGAGG ATTAACTTTA GTGGCTCATC CCAAGGGAAA AAATGTCAGA AGATTAGCTT CTATGTCAGG TGGTGAAAAA TCGTTAACCG CTTTAAGTTT TTTATTTGCT TTGCAAAAGT ATAAGCCTTC ACCTTTTTAT GCATTAGACG AGGTTGATAG TTTTTTAGAT GGCATTAATG TTGAAAGGTT GTCAAAACTA ATATCAAATC AGTCATCAAA TGCTCAATTT ATAGTCGTAA GTCATAGAAG GCCTATGATT AGTGCATCTG AACGAACAAT TGGGGTTGCG CAAGCAAGAG GTGCTAATAC TCAAGTTCTT GGGTTACCAA ATGCTGCATA A
|
Protein sequence | MRLVHINQVE FENFKSFGGN VKIPLEEGFT VVTGPNGSGK SNILDGILFC LGLANSRGMR AERLPDLINN SKVKEGKSSE TSVSVKFNIQ DWSPREDLPP LELEEEEIAL NKGQKEWLVS RKLRLMPGGS YASTYTSDGK QCTLQQIQRI LRDISVDPEG SNVVMQGDVT RIVSMNNKER RNLIDELAGV ALFDTRIEQT NAKLNDVFER QERCEILENE LQSSKNKLEK ECEKAKRYKE LKAKLLQIME LEKVLIYEKQ VKHVESIEKK ESEIEKNKIL FNKEKESISK EISVLEDALK ILVDELKEKG EDKLIKVNSD IGSINSSLRE LDRISSLNKE EGIKLQKQRD EIAISKRNIE SEKMRQENFD DNFLNQLNFQ IDDLTLKHKL SRKKLSDAAG ESGEFSKQSI KLNAELESIK NQINPLEIKK RKLEEETIQN NIQKDEILSQ IESLDLEKQK LFQGNQRKKE TSDTKNKNLA SNSAEIHSLK NEIDLLIKTK SRLNNEQLRL EKDLSRFESR KEALNESRGS YALRILLEAG LEGIHGYVAQ LGEVSEKNRY ALEIAAGNRL GQIVVDNDHI AAKAIEILKK KKAGRLTFLP LNRIKSQKKN YAISRFENNR ENGFIDKAIN LITFDEVYSD VFRYVFGDTL VFSDLSSARL SIQKNRLVTL SGELLEASGA ITGGSKLNKD LAYRFGINND NDDSSPIKER LLVIEEALKE SNNDLILKNN RLSILNSNRS QIIEDWASFN KEIEVNQDSL KAVLQRIEDC KSRLNKLDTA NNLLVKELGH LKNQLKPYHD KFDQLQTIQK ANYEKNQKSS LIAFNDDFNN LDKKLELLIK ERNTLLDKKN QFALNKERIN NSLKITLLQE KNLQESIKQL AIAHSEWIEK RDQFKKELSD LDNQKNSLEK NLGLLRRKRD ELNSSISNKR QEYNNYLLKL EYLERDMHSL KEEMRSEKIK LENYKKDLPN PSPEFGEYEG KGLESLQSEI SIINAKLESL EPVNMLALDE LEELIERLNG LREKLEILSN ERSELLLRIE TVSTMRQEAF MQAFTEVDRH FREIFANLSD GDGFLQLENP NSPLEGGLTL VAHPKGKNVR RLASMSGGEK SLTALSFLFA LQKYKPSPFY ALDEVDSFLD GINVERLSKL ISNQSSNAQF IVVSHRRPMI SASERTIGVA QARGANTQVL GLPNAA
|
| |