| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A9601_00481 |
|---|
| Symbol | dadA |
|---|
| ID | 4716730 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. AS9601 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008816 |
|---|
| Strand | - |
|---|
| Start bp | 51387 |
|---|
| End bp | 52496 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 640077745 |
|---|
| Product | putative thiamine biosynthesis oxidoreductase |
|---|
| Protein accession | YP_001008443 |
|---|
| Protein GI | 123967585 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | [TIGR02352] glycine oxidase ThiO |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.254103 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACAAG AAACCAAAAA TTCAATATTA ATCATTGGAG GTGGACTTTT AGGTTTATCT
ATTGCTTATG AATTTTCAAG AAATAGCTTC AAAGTTTTAG TTTTAAGCAA AAACAGAAAT
GAATCAGCTG GATTTGTTGC TGCAGGAATG TTAGCTACTC ATGCTGAAGG GCTCGAAGAT
GAATTACTAA AATTTGGCCA AGAAAGTCAA AATCTAATTC CAAAGTGGAT ACAAAGTATT
GAACAAGATA GTAATATTAA ATGCGGTTTA AAAAAATGTG GCATTGTAGT TCCTTTTAAA
AACAAAGAAG ATCTTGAAGC GTTTCCCACT TATGAATATG GAAAATATTT AAATCACAAA
GATCTTCAAA CAGAAATCAA TGGAATGAAT TCTATTTGGA AACATGGTTT ACTTTTTGAA
CAAGATGGTC AAATAGATAA CCGAAGAAAA CTGATGCGTG CTCTTGAGAG AGCATGCTCC
TTGAATGGAG TCGAATTTCA AGAAGGATCA GAAGTAGAGG ATTTAACATT CGAAAAAAAC
AAAATTACAG GTGCAACAGT TTTATGTGCC ACTGGGGAAA TAAAAAAAAT TAACTGCGAA
AAAGCAATTA TATGCAGCGG TGCGTGGAGT AAAAAAATTT TTAAAAAAAT TCCAGTCTTT
CCTGTAAAGG GACAAATGCT ATCAATACAA GGTCCAACAA ATTTTTTAAA AAGGGTTATT
TTTGGTCCAA AAACTTATCT AGTACCCCGT GATGATGGAC TTATTATAGT TGGAGCGACA
GTTGAAAAAG ATTCAAAATT TAATCAAGGT AATACTCCTA ATGGAATAAA ACAACTGCAA
GAAGGCATTC GCTCTTTATT GCCAGAAGCT ATTAATTGGC CACAAATGGA ACATTGGTGG
GGCTTTAGAC CTTGCACACC AGATCTAAAA CCAATAATTG GAAAATCAAA AATTGAAAAT
CTTTATATAG CTACAGGACA TTACAGAAAT GGAGTTTTAT TTTCTGCAAT AACAAGTGAT
CTTCTTTTGA AAATAGTTCA AAATAAAAAT CTCAAAGAAA TAGAGAAAAG CTTTTTAGAA
AAATTTAGTT TAGATAGATT TGCGATTTAA
|
|---|
| Protein sequence | MAQETKNSIL IIGGGLLGLS IAYEFSRNSF KVLVLSKNRN ESAGFVAAGM LATHAEGLED
ELLKFGQESQ NLIPKWIQSI EQDSNIKCGL KKCGIVVPFK NKEDLEAFPT YEYGKYLNHK
DLQTEINGMN SIWKHGLLFE QDGQIDNRRK LMRALERACS LNGVEFQEGS EVEDLTFEKN
KITGATVLCA TGEIKKINCE KAIICSGAWS KKIFKKIPVF PVKGQMLSIQ GPTNFLKRVI
FGPKTYLVPR DDGLIIVGAT VEKDSKFNQG NTPNGIKQLQ EGIRSLLPEA INWPQMEHWW
GFRPCTPDLK PIIGKSKIEN LYIATGHYRN GVLFSAITSD LLLKIVQNKN LKEIEKSFLE
KFSLDRFAI
|
|---|
| |