Gene A9601_00461 details

Gene Information

• Locus tag: A9601_00461
• Symbol: speA
• ID: 4716728
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. AS9601
• Kingdom: Bacteria
• Replicon accession: NC_008816
• Strand: -
• Start bp: 48856
• End bp: 50802
• Gene Length: 1947 bp
• Protein Length: 648 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 640077743
• Product: arginine decarboxylase
• Protein accession: YP_001008441
• Protein GI: 123967583
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1166] Arginine decarboxylase (spermidine biosynthesis)
• TIGRFAM ID: [TIGR01273] arginine decarboxylase, biosynthetic

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGACCAATT TTGAGCCGAA AAAATTCAAG AATATTTGGA CTATTGAAGA TAGTATTTCG 
TCTTATAATA TAGACAAATG GGGAGATAAA TATTTTTCTA TAAATTCCAA AGGAAATATA 
TCAGTAACTA AAGATATAAA ATCTGAAAAT AAGATTGATC TTTTTAAGCT TGTCAAAGAA 
CTTAAGAGTA GAGAAATAAA TCCTCCATTA ATCATAAGAT TTAATGATAT CTTGAAAGAT 
CGAATAAATG CATTACATGA CTCTTTTTTA AAAGCAATAA AAACCTATAA ATATAAGAAC 
ATTTATCAAG GCGTTTTTCC TGTCAAATGT AATCAACAGA AAAATGTCCT AGAAAAGATA 
ATAGAGTTTG GTAGCCAATG GAATTTTGGT TTAGAAGTAG GAAGTAAATC AGAACTATTA 
ATTGGCCTTG CACTTCTTGA AAACCAAAAT TCATTACTAA TATGCAACGG ATATAAAGAT 
AAAAAATATA TTGAAATTGC TACTTTGGCC AGAAAACTCG GCAAAAATCC AATAATAGTT 
ATTGAACAAC GAGATGAGGT AAAAAGAATT ATTCAAGCAG TTCAAGAACT TAAAGCGACT 
CCATTGATAG GAATTAGAGC AAAGTTATCA AGTAAAAGTA GTGGTAGGTG GGGTAAATCT 
ATTGGAGATA ATTCCAAATT TGGATTATCA ATCCCAGAAA TTATGTTGAC AATAAAAGAA 
CTAAAAGAAG CAAATCTTAT CAACGAAATG AAATTGCTCC ATTTTCATAT AGGCAGTCAA 
ATAAGTGATA TTGCTGTGAT CAAAGACGCA TTACAAGAAG CGAGTCAAAT ATATGTTGAA 
CTATGCAAAC TAGGCGCTCC AATGCAATAT ATCGACGTTG GGGGTGGATT AGGAATAGAT 
TTTGATGGAA CTAAAACCTC CTCCAACACT TCTACTAATT ATTCTCTCCA AAATTATGCT 
AACGATGTAA TTGCAACTAT TAAGGATTCA TGTGAATTAA ATAATATCAA GCATCCAACC 
ATAATCTCAG AAAGTGGAAG AGCAATAATT AGTCATTGTT CAGTTTTAAT TTTTAATGTC 
TTAGGAACAA GTCATGTCAG TTCCAAACTA CAAATTTTTG ATAAAAAAAA TCAACAATTA 
ATAATTTCAA ATTTACTTGA TACTTTCTAT GAATTAAAAA AACTTAAAAA TAAAAAAATA 
AATTTATCTC AAATAATTGA ACTATGGAAT GATGCAAAAA AGTTTAAAGA AGATTGCTTA 
GTCGCTTTTA GATTAGGATT TTTAAGTTTG GCAGAAAGAG CTTATGCCGA AGAACTTACT 
TGGGCTTGCG CAAAAGAAAT TTCTAATAAC CTGAATAATG ATGAAATCAA TCACCCTGAT 
TTATCTGAAA TTACAGAAAC TCTTGCATCA ACTTATTATG CAAATTTATC TATATTTAAA 
TCTATTCCTG ATAGCTGGGC AATAAATCAG ATTTTTCCAA TAGTACCAAT ACATAGGCAC 
TTAGAGGAGC CGTTCTGCAA AGGCAACTTT GCAGATTTAA CTTGTGATTC AGATGGGAAA 
CTAAATAATT TTATTGATAA TGGAAAAATT AAATCACTAC TAAATTTGCA TAAGCCAGAA 
GAAGATAAAG ATTACCTAAT TGGAATTTTT ATGACTGGAG CCTATCAAGA AGCATTAGGA 
AACTTGCACA ATTTATTTGG CAGTACCAAC GTTGTTCATA TAGACATAAA TCAAGATAAT 
TCATATAAGG TCAGAAATAT TATTAAAGAG GACAGTAAAT CTGAAATTTT ACAATTATTA 
GATTACAGTT CAGCTTCTTT GGTTGAATCT ATAAGAATTA ATACTGAATC AGCAATTGAT 
CAAAAAAAAT TAACTATTGA AGAAGCAAGG AAATTAATGG ATCAAATCGA AATTAGTCTC 
AGAAAAAGTA GTTATTTATC AGAATGA 

 

Protein sequence

MTNFEPKKFK NIWTIEDSIS SYNIDKWGDK YFSINSKGNI SVTKDIKSEN KIDLFKLVKE 
LKSREINPPL IIRFNDILKD RINALHDSFL KAIKTYKYKN IYQGVFPVKC NQQKNVLEKI 
IEFGSQWNFG LEVGSKSELL IGLALLENQN SLLICNGYKD KKYIEIATLA RKLGKNPIIV 
IEQRDEVKRI IQAVQELKAT PLIGIRAKLS SKSSGRWGKS IGDNSKFGLS IPEIMLTIKE 
LKEANLINEM KLLHFHIGSQ ISDIAVIKDA LQEASQIYVE LCKLGAPMQY IDVGGGLGID 
FDGTKTSSNT STNYSLQNYA NDVIATIKDS CELNNIKHPT IISESGRAII SHCSVLIFNV 
LGTSHVSSKL QIFDKKNQQL IISNLLDTFY ELKKLKNKKI NLSQIIELWN DAKKFKEDCL 
VAFRLGFLSL AERAYAEELT WACAKEISNN LNNDEINHPD LSEITETLAS TYYANLSIFK 
SIPDSWAINQ IFPIVPIHRH LEEPFCKGNF ADLTCDSDGK LNNFIDNGKI KSLLNLHKPE 
EDKDYLIGIF MTGAYQEALG NLHNLFGSTN VVHIDINQDN SYKVRNIIKE DSKSEILQLL 
DYSSASLVES IRINTESAID QKKLTIEEAR KLMDQIEISL RKSSYLSE