Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A9601_00341 |
Symbol | dhsS |
ID | 4716716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. AS9601 |
Kingdom | Bacteria |
Replicon accession | NC_008816 |
Strand | - |
Start bp | 32388 |
End bp | 33551 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640077731 |
Product | soluble hydrogenase small subunit |
Protein accession | YP_001008429 |
Protein GI | 123967571 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCCATAC AACAAAAATT ATCATTGATG ATTCCTGGAC CCACACCAGT TCCAGAAAAA GTATTACAAG CATTAAGTAA ACATCCAATA GGCCATCGCA GCAAAGAATT CCAAGATCTC GTAGAGAGTA CTACTAAAAA TTTACAATGG CTTCATCAAA CTCAAAATGA TGTTCTAACA ATTACTGGAA GTGGGACTGC CGCAATGGAG GCCGGAATAA TAAATACCTT AAGTAGAGGA GATAAAGTAA TTTGTGGAGA CAATGGAAAA TTTGGAGAAA GATGGGTAAA AGTTGCTAAA GAATTTGGTC TAGAAGTAAT AAAAATTGAT TCAGAATGGG GTACTCCACT TGATCCAGAA AAATTCAAAA AGGTATTAGA AGAAGATACA CAAAAAGAAA TTAAAGCTGT TATTTTGACT CATTCTGAAA CCTCAACAGG TGTAATTAAT GACTTAAAAA CCATAAGTTC ATATATTCGC AAACACAATA CAGCTTTATC AATTGTTGAT TGCGTTACAA GTCTTGGAGC TTGCAATGTT CCAGTAGATG AATGGGAATT AGATATCGTT GCTTCAGGAT CACAAAAAGG TTATATGATA CCTCCAGGGC TTAGTTTTAT AGCAATGAGC CAAAAAGCAT GGGAAGCTGC AGAAAAATCT AATCTACCAA AATTTTATTT AAATTTAAAA TCATACAAAA AAAGTCTTTT AAGTAACAGT AACCCATATA CTCCAGCAGT TAATTTGGTT TTTGCTTTAG ATGAATCTTT AAAAATGATG AAAGAAGAAG GCTTAGATAA CATTTTCTTC AGACACAATA AACATAAATT AGCAATGAGC AATGCTGTAA AGGCTTTAGA TCTTAAATTA TTTGCTGATG AAAAATACTT GAGCCCATCA ATTACTGCGG TAAAAACTGA AGGAATAGAT GCTGAAGAAT TTAGGAAAAC TATAAAAAAT AATTTTGATA TTTTACTTGC TGGTGGTCAA GATCATATGA AAGGAAAAAT ATTTAGAGTC GGGCACTTAG GTTATGTTAA TGATAGAGAT ATTATTACGG TGGTTTCTGC TATAAGTAAT ACACTTCTCA ACCTCGGTAA AATTACAGCC AAACAAGCTG GTGAAGCATT AAAAGTTGCT TCAAGATATC TAGCAGAGAA TTAA
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Protein sequence | MAIQQKLSLM IPGPTPVPEK VLQALSKHPI GHRSKEFQDL VESTTKNLQW LHQTQNDVLT ITGSGTAAME AGIINTLSRG DKVICGDNGK FGERWVKVAK EFGLEVIKID SEWGTPLDPE KFKKVLEEDT QKEIKAVILT HSETSTGVIN DLKTISSYIR KHNTALSIVD CVTSLGACNV PVDEWELDIV ASGSQKGYMI PPGLSFIAMS QKAWEAAEKS NLPKFYLNLK SYKKSLLSNS NPYTPAVNLV FALDESLKMM KEEGLDNIFF RHNKHKLAMS NAVKALDLKL FADEKYLSPS ITAVKTEGID AEEFRKTIKN NFDILLAGGQ DHMKGKIFRV GHLGYVNDRD IITVVSAISN TLLNLGKITA KQAGEALKVA SRYLAEN
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