| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A9601_00271 |
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| Symbol | pdxA |
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| ID | 4716709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. AS9601 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008816 |
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| Strand | - |
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| Start bp | 28262 |
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| End bp | 29296 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640077724 |
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| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
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| Protein accession | YP_001008422 |
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| Protein GI | 123967564 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00317118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATTTTC AAAATACAAA TAAACCATTA AAGGTAGTAA TAAGCGTAGG AGATGAGTCA
GGTATTGGAC CCGAAATAAT CTTAAAAGCA CTTTGTTCTA ATGAGATATC AGAAAATATT
GAATTTAAGT TAGTTGGATC AAAAAAAAAT TTACAAAATA CATATGAACA TCTTAGATCC
TTAGGATTAG AAAACCTTGC AAATCCTAAA AATTTAAAGG TAATAGATCT CGAGATTTCT
CCATCAAATA ATAACCCTAA ATCAAATTAT GGTGATTCAA GTTTCCAATA TTTAAAAAAA
GCAATTGAAA TTGTAAAACA ATATCCCAAC TCAGCGCTAG TAACTGGGCC AATTTGCAAG
AAATCATGGT CTCTAGCAGG GCATTACTTC TCTGGTCAAA CCGAAGTACT AGCAAAATCA
TGTGGAGTAA AAAACGTTGG AATGTTATTC ACAGCAAAAT CACCAATTAC AGGTTGGAGA
TTTAATACTT TACTAGCTAC AACCCACATA GCACTTTGTG AGGTTCCAAA GATATTAACT
ACAGAATTAA TACACTCTAA ATTAGACCTT TTCAAAGATT TTTGTAATAC CTTTATTGAT
AAACCTACTT TAAAAGTAGC AGGGCTGAAC CCCCATGCCG GCGAAGAGGG CATTTTAGGT
CATGAAGAAA AAGATTGGCT TAATGACGCA TTAATTACTT GGAGTAACAA GAATAGAGAT
ATAAAATTAT TAGGACCTTT ATCACCAGAT AGTTGCTGGA ATTCTTCCGT AAAAGCCTGG
AGTGACAAAA ATGCTGAAAA GCATGATGGC ATTCTTGCTA TGTATCATGA TCAAGGTTTA
ATACCAATGA AAGTCATAGC TTTTAATTAC TCAGTCAATA CCACAATCGG TTTACCCTTT
ATAAGAACAT CTCCAGATCA TGGAACGGGA TTTGATATTG CTGGCAAAGG AATTGCTCAA
TCTCAAAGCA TGATTGAGGC TATAAAGACT GCAATAGAAA TGACTAAAAA TTCAAGATTG
CTTAACACGC ATTAG
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| Protein sequence | MNFQNTNKPL KVVISVGDES GIGPEIILKA LCSNEISENI EFKLVGSKKN LQNTYEHLRS
LGLENLANPK NLKVIDLEIS PSNNNPKSNY GDSSFQYLKK AIEIVKQYPN SALVTGPICK
KSWSLAGHYF SGQTEVLAKS CGVKNVGMLF TAKSPITGWR FNTLLATTHI ALCEVPKILT
TELIHSKLDL FKDFCNTFID KPTLKVAGLN PHAGEEGILG HEEKDWLNDA LITWSNKNRD
IKLLGPLSPD SCWNSSVKAW SDKNAEKHDG ILAMYHDQGL IPMKVIAFNY SVNTTIGLPF
IRTSPDHGTG FDIAGKGIAQ SQSMIEAIKT AIEMTKNSRL LNTH
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