Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A9601_00151 |
Symbol | grpE |
ID | 4716697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. AS9601 |
Kingdom | Bacteria |
Replicon accession | NC_008816 |
Strand | + |
Start bp | 18225 |
End bp | 18944 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640077712 |
Product | heat shock protein GrpE |
Protein accession | YP_001008410 |
Protein GI | 123967552 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00526535 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGAAA ATCAATCAGA CAATATTGAT AATAAAGAAA ATGATCTTTC TGATCAGGAT AATGCTCTTG AAAATGTATC ATCTGCGCAA GAATTAACTA CTGAAAATAA TGAATTATCT TCTCAAAAAA CAGAAGAAAT AAATACCGAA GAATTAAAAA ATTCTATTTC TAATAATGAT GCAAGATTAG AGCAATTAGA AAAAGAGCAT GAAACATTAA AAAATCAATA TGTAAGGATT TCAGCAGATT TTGATAATTT TAGAAAAAGG CAGTCTAGAG ATCAGGATGA TTTAAAAATT CAACTTGTTT CAAAGACTTT AACTGCAATA CTACCTATTG TTGATAACTT CGAGAGAGCA AGACAACAAC TAAAACCTGA AAGTGAAGAA GCTCAATCTC TTCATAGAAG TTATCAAGGA TTATATAAAC AATTGGTAGA AGTTTTGAAA CAACAGGGAG TTTCCCCCAT GAGAGTTGTT GGTCAGCAAT TTGACCCAAG CTTGCATGAA GCTGTATTAA GAGAGCCTAG TGAAAAGTTT GAAGAAGATT TTATAATTGA AGAATTGCAG CGAGGATATC ATCTTGAAGG TAAGGTTTTG AGACATGCTT TGGTAAAAGT TTCTATGGGA CCTGGAAAAC AAAATTCACA AGAGGAAGTA GAAAAGGATA AAGTTGAAGG GGATATTGAT TCAGAGGAAA ATACTTCTGA AGATGTATAA
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Protein sequence | MIENQSDNID NKENDLSDQD NALENVSSAQ ELTTENNELS SQKTEEINTE ELKNSISNND ARLEQLEKEH ETLKNQYVRI SADFDNFRKR QSRDQDDLKI QLVSKTLTAI LPIVDNFERA RQQLKPESEE AQSLHRSYQG LYKQLVEVLK QQGVSPMRVV GQQFDPSLHE AVLREPSEKF EEDFIIEELQ RGYHLEGKVL RHALVKVSMG PGKQNSQEEV EKDKVEGDID SEENTSEDV
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