Gene A9601_00131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA9601_00131 
Symbol 
ID4716695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. AS9601 
KingdomBacteria 
Replicon accessionNC_008816 
Strand- 
Start bp16630 
End bp17634 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content31% 
IMG OID640077710 
ProducttRNA-dihydrouridine synthase A 
Protein accessionYP_001008408 
Protein GI123967550 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0042] tRNA-dihydrouridine synthase 
TIGRFAM ID[TIGR00742] tRNA dihydrouridine synthase A 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.0765637 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTACA TTCAACATAA TTCTATAAAA AATATTCATA AATTAAGTAT TGCTCCAATG 
ATGGACTGTA CTGATAAACA TTTCAGAATG ATAATGAGAA AAATAAGTTC TGAAGCTCTG 
TTGTATACAG AAATGATTGT GGCCCAAAGT TTAGTTCATA CGAATAAAAA AGAAAATTTT 
CTAGATTTTA ATGGTGAAGA ACATCCGATA TCGATTCAGT TTGGTGGGGA CGATCCTAAA 
ATCCTTAAAG AGGCAGCTCG AATGGCGCAA GATTGGGGTT ATGACGAAAT AAACTTTAAT 
GTTGGTTGTC CGAGTCCAAG GGTCTGTTCT GGAAATTTTG GCGCTTCACT TATGAAAGAC 
CCTGAAAAAG TAGCAAAATG TATAGAATCC TTAAAACTTA ATTGCGATTT ACCGGTTACG 
ATCAAACACA GAATTGGTGT AGACAATGAT GATAGTTTCG TTAAATTGAA TAATTTTGTG 
AGAATTGTTG CAAATGCTGG TGCAGACAGA TTTACCGTTC ATGCAAGAAA AGCCATATTA 
ACAGGTCTAA ATCCAAAACA AAACAGGACC ATACCTCCAC TAAATTATGA TGTAGTAAAA 
AAATTGAAAA ATTTAAATCC AAGCTTATTA ATAGAAATCA ATGGGGGTTT AACAAATATA 
GATGAATCAT TAAAAGCCTT AAATGATTTT GATGGAGTTA TGATAGGACG GTCAATATAT 
AAACATCCCT TAAGATGGTC TGAAATTGAT CAAAAGATTT ATGGAATTAA TACAAAACCC 
AAATCTGCTT CGAATATTAT ATTCTCCTTA ATTCCATACA TAGAAAAACA TTTAAGTAAT 
GGAGGAAAAT CTTGGGATAT TTGTAAACAT CTTATAAATT TAGTTGAAGG TATACCAAAA 
GCTAAAATTT GGAGAAACCA AATTTCAAAT AAATCAATAA AAAAAGAATT AAATATTGAA 
TATCTATTTA AATTAACAAC AGCGCTTAAA GAAATGGGTT ACTAA
 
Protein sequence
MSYIQHNSIK NIHKLSIAPM MDCTDKHFRM IMRKISSEAL LYTEMIVAQS LVHTNKKENF 
LDFNGEEHPI SIQFGGDDPK ILKEAARMAQ DWGYDEINFN VGCPSPRVCS GNFGASLMKD 
PEKVAKCIES LKLNCDLPVT IKHRIGVDND DSFVKLNNFV RIVANAGADR FTVHARKAIL 
TGLNPKQNRT IPPLNYDVVK KLKNLNPSLL IEINGGLTNI DESLKALNDF DGVMIGRSIY 
KHPLRWSEID QKIYGINTKP KSASNIIFSL IPYIEKHLSN GGKSWDICKH LINLVEGIPK 
AKIWRNQISN KSIKKELNIE YLFKLTTALK EMGY