Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A9601_00101 |
Symbol | rsbU |
ID | 4716692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. AS9601 |
Kingdom | Bacteria |
Replicon accession | NC_008816 |
Strand | + |
Start bp | 13122 |
End bp | 14465 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 640077707 |
Product | protein phosphatase 2C domain-containing protein |
Protein accession | YP_001008405 |
Protein GI | 123967547 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACAAACT ATCAAAAAGA AAAAATATTT TCGAACAAAT TTATTAAAAA TTTTTTAGAA AACGAATCTA CAGAAATTTT AAAAAATAAA TATAAATTTG CTGAAATTGC ATCTTCACTA GCATATTATT TAAAATCGTT TTCCAACATA AATAAATTAT TAGATTATAT TTCTTTAATT TTTAAACATA TTTTTTCTGA GAATATAATT TTAATTATTC CTTTAAATTA TGAGGGTGAT ATATGGAATG AAAATATAAA AATTTCTGTT AATGATAAAT ATTTAACAAT TCAAAAAGAA ATCAATAAAT TTTTGAATCA ATTTCATTTT TCAAAAAATT TTAAAATAAA AGAAATTTTA ACTTTTGAAA ATGCTTTAAA AAATAATTTT AAAGAATATA AAATTGAAAC AAAAAAAATA ATATCTAGAG GTAAATGTAG AGGATTTATT TATATTTTTA GCAAAGATAT TTATATACAG TCGATTACTG AAGATAGTAA TTTTAATTTT ATTGAAAATT GTCTAGCTGT TGGATTAGAA AATCACTATT TATTAAAAAC AAAGAAAAAG CATGAAAACG TAGATAGAGA AATCTCCACT GGTGCTGAAA TTCAATCTCA ATTACTTCCG GATTATTGCC CAATTATCCA TGGTATAGAT TTAGCAGCTC ATTGTAGACC AGCTCTTCAG CTCGGAGGGG ATTACTATGA TTTTATGTGC TTGAAGACGA ATATCTCTGA AAAAAGAAAA GAAAAATCAA GATGGGCTTT TGTTATAGGT GATGTCATGG GTAAAGGGAT TCCGGCTGGC CTTTTAATGA CGATGTTGAG AGGAATGCTA CGCGCTGAGG TTCTTACAGG TCTGCCTCCA GATAGAATTT TGCATGATTT GAATCAACTA GCAATAAATG ATTTAGATCA ATCACATAGA TTTGTGACTT TATTTTACTC AGATTATGAC CCTAGAACTA GAAAATTGAG ATTCGCTAAT GCAGCACATA ATCCTCCTCT GCTTTGGAAA AGTTCAGATC AGAAAATTAT TAAATTAGAT GCAGAAGGAT TTGTACTTGG ACTACAAAAA GATGCAGAAT ACCAATGTGG TGAAATAAAG CTTAATCAAA ATGATTTAGT TCTCTATTAC ACAGATGGAG TAATAGATAC TTCTAATTCC TTAGGGCAAA GATTTGACGA GGAAAGGTTA ATTAAAACGC TTACAAAATT TTGCAAGCAA TCATATTCAT CCCAAGAAAT TTTAAATAAA ATATTTAAAA AGTTAGATGA TTTTACTGGA CAAAATAGAC ACTTGGAAGA TGACGCCTCG ATGGTTATTT TTCAATTGAA ATAG
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Protein sequence | MTNYQKEKIF SNKFIKNFLE NESTEILKNK YKFAEIASSL AYYLKSFSNI NKLLDYISLI FKHIFSENII LIIPLNYEGD IWNENIKISV NDKYLTIQKE INKFLNQFHF SKNFKIKEIL TFENALKNNF KEYKIETKKI ISRGKCRGFI YIFSKDIYIQ SITEDSNFNF IENCLAVGLE NHYLLKTKKK HENVDREIST GAEIQSQLLP DYCPIIHGID LAAHCRPALQ LGGDYYDFMC LKTNISEKRK EKSRWAFVIG DVMGKGIPAG LLMTMLRGML RAEVLTGLPP DRILHDLNQL AINDLDQSHR FVTLFYSDYD PRTRKLRFAN AAHNPPLLWK SSDQKIIKLD AEGFVLGLQK DAEYQCGEIK LNQNDLVLYY TDGVIDTSNS LGQRFDEERL IKTLTKFCKQ SYSSQEILNK IFKKLDDFTG QNRHLEDDAS MVIFQLK
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