Gene A9601_00001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA9601_00001 
SymboldnaN 
ID4718666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. AS9601 
KingdomBacteria 
Replicon accessionNC_008816 
Strand
Start bp168 
End bp1325 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content30% 
IMG OID640077697 
ProductDNA polymerase III subunit beta 
Protein accessionYP_001008395 
Protein GI123967537 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.280893 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATTA TTTGTAATCA AAATGAATTA AATAATGCTA TACAACTAGT AAGCAAGGCA 
GTTGCTTCAA GGCCAACGCA TCCAATTCTT GCAAACATAC TTTTAACAGC TGACGAAGGA
ACTAATAAAA TTAGTGTCAC AGGATTTGAC TTAAATTTAG GAATTCAAAC TTCTTTTGAT
GGAACTGTCA AAAATAGTGG AGCTATCACT ATACCCTCAA AACTTTTATC AGAAATAGTA
AACAAACTAC CTAATGAAAC TCCTGTTTCT CTAGAAGTAG ACGAAAATTC AGATAATATT
CTAATAAAAA GTGATAGAGG TTCTTTTAAT CTAAAAGGGA TACCCTCTGA TGAATATCCT
AATTTGCCAT TTGTTGAAAG CGGTACTTCT TTGAATATTG AGCCTAGTTC TTTTTTAAAG
GCTTTAAAAT CTACCATTTT TGCCAGTAGT AATGATGATT CAAAGCAACT ACTCACAGGT
GTCAATTTTA CTTTCAAACC AAATTATTTA GAGTCTGCTT CTACAGATGG CCATAGATTG
GCTGTTGCCT TAATTGGTAA GGAAGAACAA ATTGAAAATA AAGAAAACTT ATCTTCAAAT
GTTGATGATT TATCGGTAAC TATCCCAACT AGATCATTAA GAGAAATTGA AAAACTAGTA
TCTTTGAGAA GCTCAGAAAA TTCAATTAAG CTTTTCTATG ACAAAGGTCA AGTAGTATTT
ATATCTTCTA ATCAAATAAT TACTACGAGA ACTTTAGAAG GTACTTATCC TAATTATTCA
CAATTAATTC CTGATTCTTT TTCTAAAATT ATAAATTTTA ATACAAAAAA ATTAATTGAT
TCATTAGAAA GAATTGCTGT TTTGGCAGAT CAGCAAAGTA GTGTTGTAAA GATTAAATTA
GATGATACAG ATTTAGCTTC AATCAGCGCA GATGCTCAAG ATATTGGAAA TGCAAATGAA
TCAATACCTG TTTCTTATTC AGGAGAAAAT TTTGATATTG CATTTAATGT AAGATATTTG
TTAGAAGGTT TAAAAGTTAT TGCCTCTGAA AATGTACTTT TAAAGTGTAA TATTGCAACT
ACTCCAGCTG TTTTTGTACC AGAAGATAAT CTCAATTCTT TTACGTATCT AGTTATGCCA
GTGCAGGTTC GTTCTTAA
 
Protein sequence
MEIICNQNEL NNAIQLVSKA VASRPTHPIL ANILLTADEG TNKISVTGFD LNLGIQTSFD 
GTVKNSGAIT IPSKLLSEIV NKLPNETPVS LEVDENSDNI LIKSDRGSFN LKGIPSDEYP
NLPFVESGTS LNIEPSSFLK ALKSTIFASS NDDSKQLLTG VNFTFKPNYL ESASTDGHRL
AVALIGKEEQ IENKENLSSN VDDLSVTIPT RSLREIEKLV SLRSSENSIK LFYDKGQVVF
ISSNQIITTR TLEGTYPNYS QLIPDSFSKI INFNTKKLID SLERIAVLAD QQSSVVKIKL
DDTDLASISA DAQDIGNANE SIPVSYSGEN FDIAFNVRYL LEGLKVIASE NVLLKCNIAT
TPAVFVPEDN LNSFTYLVMP VQVRS