Gene CJJ81176_pTet0038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCJJ81176_pTet0038 
Symbol 
ID4711600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni subsp. jejuni 81-176 
KingdomBacteria 
Replicon accessionNC_008790 
Strand
Start bp30090 
End bp31265 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content32% 
IMG OID639856953 
ProductcmgB10 
Protein accessionYP_001004042 
Protein GI121999289 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2948] Type IV secretory pathway, VirB10 components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGATA AAGAACAAGA TAATTTAGAC AATGATTTTG AAAATCATAC AAGTGATTTA 
CACGATCAAA AAAATCATCT TAGAAAGATA CAAGCTTATG TAATTTTTGC TGTGGGTGGA
TTATTATTAG TTTTAATATT AGTTTATTTT TTAAAATCAT TTTTAAGTAG CAATACAACT
ACCGAAGAAG TACAAAAAGA AGATAATAAA GATTTGGCAC AAAGTGTTAA AACAAAGGAA
TTTATTCCAC CTCCTCCACA AAAAACATTT GATGAACTAA TTGCACAAGA ATCACCAAAA
CCGACACAAG ATTTAATACT TGAACCCAAA CCTCCAAAGC CTAGAATTGT TAAAGGTGCA
GGAGTTACTG TTGTCGCTTC ATCTAATAAT GATGGATTTG GAAATAATGG CACAGGAAAC
AGGGAAGAAT TTGGAGAAAA ACCTAACACA GTGTTTGAGT TTGGACAAAA TGGTTCTTTA
CAAAACTCTA ATAATTTACA AGGTGGTAGT AATGGAGATT TTGTTGGAGA GGTCTTCACT
CCCACAATCG CTAAAGTTAG CGAATTTGAT CAAAATTTAC TATTACCTAA AGGAACTTAC
ATAGGCTGTG CTTTAAAAAC AAGATTGGTA AGTTCTATTA AAGGTGGAAT CGCTTGTATT
GTATCAAATG ATGTCTATTC TGCTAATGGA AATACTCTTT TAATTGAAAA AGGTAGCACT
ATTACAGGAA CTTTTAATAC TGGACAAATG GATGATGGAA TGGATAGATT ATTTGTAATT
TGGCAAGAAA TTAGAACACC GAACAATATC ATTATCCCTG TTTATTCAGG TGCTACCGAT
GAATTAGGTG CAAGTGGCGT TCAAGGTTGG GTAGATCATC ATTACTTAAA ACGATTTGGC
TCTGCTGTTT TACTATCAAT GATAGATGAT TCACTGGCTA TCTTAGCGGA TCAAATTGCA
GGTAAAGATA ATAAAAATAA TTATGCCAAT TACACTGAAA ATACAAGAGA TTCTGCAAAA
GAAATCGCAA ATACAGCACT AGAAAAAATG ATTGATATTA AACCTACACT TTATAAAAAT
CAAGGTGATT TGGTCGGTGT TTATGTTAAT CGTGATATTG ATTTTTCAAA AGTTTATAAA
CTTACAAGGA AAAAGAATGT CAATAACGCT AGATAA
 
Protein sequence
MQDKEQDNLD NDFENHTSDL HDQKNHLRKI QAYVIFAVGG LLLVLILVYF LKSFLSSNTT 
TEEVQKEDNK DLAQSVKTKE FIPPPPQKTF DELIAQESPK PTQDLILEPK PPKPRIVKGA
GVTVVASSNN DGFGNNGTGN REEFGEKPNT VFEFGQNGSL QNSNNLQGGS NGDFVGEVFT
PTIAKVSEFD QNLLLPKGTY IGCALKTRLV SSIKGGIACI VSNDVYSANG NTLLIEKGST
ITGTFNTGQM DDGMDRLFVI WQEIRTPNNI IIPVYSGATD ELGASGVQGW VDHHYLKRFG
SAVLLSMIDD SLAILADQIA GKDNKNNYAN YTENTRDSAK EIANTALEKM IDIKPTLYKN
QGDLVGVYVN RDIDFSKVYK LTRKKNVNNA R