Gene CJJ81176_pTet0037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCJJ81176_pTet0037 
Symbol 
ID4711589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni subsp. jejuni 81-176 
KingdomBacteria 
Replicon accessionNC_008790 
Strand
Start bp29176 
End bp30063 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content27% 
IMG OID639856952 
ProductcmgB9 
Protein accessionYP_001004041 
Protein GI121999288 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3504] Type IV secretory pathway, VirB9 components 
TIGRFAM ID[TIGR02781] P-type conjugative transfer protein VirB9 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TAATCTTGAT AAATTTATTG TTGTGTAGTT TTATTTGGGC TTTAAATATT 
CCAAAAACTT CTACATTTGA TAAAAGAATT GCTTATGCAA TTTATAATGC AAACGATGTA
TTTCAAATTA ATGCAAAAAA TGGCTATGTT AGCGTTTTAG AATTTGGTAC CGATGAAAGA
ATTATCAATA CTGCTACAGG TTTTGCAGAA GGTTGGGATT TAATTGAAAA AGACAATCTT
TTATTTATAA AACCTAAAGC TTATAAAACA CAACTTGTTC AACAAGAAAA CAATAATATA
GGAGAGAGTC AAGCATCACA AGAATTCGTT TTAGATCCAA ATCCTCATGA TTGGAAAACT
AACCTAATTG TTATTACAAA TCTAAATACT TATGTATTCG ATTTAAAACT TGTAAACCAA
AATAATAACG CTACCTATAA ACTCAGTTTT TCTTACCCTA AAAAAGATTT AAAAGCCGCT
AAAGAATTTT TAGAAGCACA AGAACAAGAA AATATACGCA GAGATTTAAA TAAAAATACC
ATTCCTAGAA ATTGGGATTT TTATATGAAA ATTAACAAAG GTAGCGAAGA CATAAGTCCA
AATTTTGCTT ATGATGATGG TGTTTTTACA TATCTTGGTT TTGATAATAC TAAAACTTTT
CCTGCTGTTT TCATGTATGA TAATGGTAAA GAAAGTATTT TAAATACTCA TATTAAAAAA
GATGGCAATT ATGAAGTTTT AGTAATTCAA AAAATTACTA AACAAATCTT GTTAAGAAGT
GGCGATAAAG TCGTTGGTAT TTTTAATCGT GGCTATGCAA AAAATCCTTT AGATAAAACA
AGAGAAACCT CCAATGAAAA TATTCAAAGA GAGATAAATA AAAAATAA
 
Protein sequence
MKKIILINLL LCSFIWALNI PKTSTFDKRI AYAIYNANDV FQINAKNGYV SVLEFGTDER 
IINTATGFAE GWDLIEKDNL LFIKPKAYKT QLVQQENNNI GESQASQEFV LDPNPHDWKT
NLIVITNLNT YVFDLKLVNQ NNNATYKLSF SYPKKDLKAA KEFLEAQEQE NIRRDLNKNT
IPRNWDFYMK INKGSEDISP NFAYDDGVFT YLGFDNTKTF PAVFMYDNGK ESILNTHIKK
DGNYEVLVIQ KITKQILLRS GDKVVGIFNR GYAKNPLDKT RETSNENIQR EINKK