| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJJ81176_pTet0023 |
|---|
| Symbol | |
|---|
| ID | 4711558 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008790 |
|---|
| Strand | + |
|---|
| Start bp | 17978 |
|---|
| End bp | 19771 |
|---|
| Gene Length | 1794 bp |
|---|
| Protein Length | 597 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 27% |
|---|
| IMG OID | 639856938 |
|---|
| Product | cpp26 |
|---|
| Protein accession | YP_001004027 |
|---|
| Protein GI | 121999274 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1066] Predicted ATP-dependent serine protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.85156 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAAAA GAAATACTAT TGATACTATT ACACTCGGAC TTTTTAGTGA TGAAGATGTT
TCTATAATCT GCGAAGATAC AATTAAACTG GAAAGGGGCT CTGTAGCTGT ATTAAGTGGC
AATAGTGAAG TAGGCAAGTC TTTTTTAGCT TTAAAGGTAT GTGCTAATGC TATTAATGAT
GGCTTAAAAC CTTTTTTTTG GAGTGTAGAA GATAAAAATA AAGCAATTTT AGGACGCATA
AAAAATATTG AAAGTTTTTA TTCTTTTAAT ACTGCGGAAC TTGAATTTTC GAATGAACTT
CCAAAAATCA ATAAAGAACC TATAAATTGC TTAAAAGAAG AACTTAATGA GTTAGCAGAT
TGCGATTTAA TTGTTCTTGA TACCTTTAGT GCATTTTTCT CAACATTAGG CTTTAAAGAT
CAAAACAATC AAAACGATGT GCAAAATTTC TTTAATATTC TAACAGATAT AGCAAAATCA
AATAATCAAG CTATCTTATT ACTTCATCAC TTAGACAAAA AAGGCGAAAG TCTTATGGGT
AGCTCTGTTA TTATCAATGC TCCTAGACTT GTTTATAAAC TTTCGTTCGA AAAGGGAGAA
GATAAAAATT CTACCACCTA TCGCTTGCTT GAGGTGCTAA AGGATAATAA TAATATCAAT
GCTGGAGAAT TTCAAAAAAC GATTAAAGTA TTGCAAAATT CTAGTATTGA TGAGCCTTCA
ATTGTAAATC TTAGAGCTAA CAGCATTGAT TCTAATACTT TAGAGATTAT CAATAAAAAA
GATATTTCTG CTGTAAGTGT TAATGAATTA GCAAAAGGCT ATGTAACAAT GAATGAAAAT
AGAGGTGTTT TTTATTTAAG CTCACGAAAG CTTACAGACA CTAATTTTTA TAAAGTATTT
AAAGAAAATG ATAATAAAAT AGATTTTAAA ATGACAGGTG CGAATGACTC ATCATATGTC
ATAAGTTTAA AGAACTCTTT GCTTACGCAA ACGCATAGGA ATATTTTAGA TGCTTTATTT
TTATATATCA AAAAAAATGT GGATACAAGT GTTATTAAAA AATATCAAGA AAATTTTTGG
GATATGGAAG TAAGATTAGA GCCTTATAAA TTCTTGAAAC AATATCTTAA TAAAAATTCT
AATAATTACT CTTGGTTGAA ACAAAAATTT ACAGAAATCT CTCGTTTTGC GTATGATTTG
GCTTTCACTC AAAATGTAGA AGATAAAGAT AAAAAAACAA TCACTCAAAG AGATAAAGGT
ATTTTAATGT TTGACTCTGT AGAGCGTATC ACAAAAGAAA ATGGAACAAT TGTATCTGTA
TTCGTGCTAA CAGTTCGTAG AGAATATATT AAAAAACTCG AAACAGAATC TACCCTTTCT
TATGATGATG ATTTATCCAA AATTCTTATT AATTTAAATT CTTTGGTGGC ACAAGATTTG
ATTAGATTTT TAACAAGTTT TCCTGATAAG AAAATTCTTA GTTATAGTGA GTTTTGTGAA
ATTAAAGCTT ATAGATTTTA TAAAGAAAGT TCTATTATTT CGAAACAAAA GAAAGAGATT
GTTAAATTAA AAGATAAACT TATAGAATTT GGAATTAATG TTTATGGCAA AGGCGTAGAA
TTTGCTAATT ATGATGATGA ATTTTTTCAT AATAAGTATA AAAATGAAAA TGATTTATTT
TTCATCTATG AAAGCAATAA TAGAGTAAAA AGATATATTA AGCGTAGTGA TCCAATGAAT
CAATTAAACA CCAAAAGCAA TAAATTTCTT TTGCAAAAAT CTTTATTTGA TTAA
|
|---|
| Protein sequence | MPKRNTIDTI TLGLFSDEDV SIICEDTIKL ERGSVAVLSG NSEVGKSFLA LKVCANAIND
GLKPFFWSVE DKNKAILGRI KNIESFYSFN TAELEFSNEL PKINKEPINC LKEELNELAD
CDLIVLDTFS AFFSTLGFKD QNNQNDVQNF FNILTDIAKS NNQAILLLHH LDKKGESLMG
SSVIINAPRL VYKLSFEKGE DKNSTTYRLL EVLKDNNNIN AGEFQKTIKV LQNSSIDEPS
IVNLRANSID SNTLEIINKK DISAVSVNEL AKGYVTMNEN RGVFYLSSRK LTDTNFYKVF
KENDNKIDFK MTGANDSSYV ISLKNSLLTQ THRNILDALF LYIKKNVDTS VIKKYQENFW
DMEVRLEPYK FLKQYLNKNS NNYSWLKQKF TEISRFAYDL AFTQNVEDKD KKTITQRDKG
ILMFDSVERI TKENGTIVSV FVLTVRREYI KKLETESTLS YDDDLSKILI NLNSLVAQDL
IRFLTSFPDK KILSYSEFCE IKAYRFYKES SIISKQKKEI VKLKDKLIEF GINVYGKGVE
FANYDDEFFH NKYKNENDLF FIYESNNRVK RYIKRSDPMN QLNTKSNKFL LQKSLFD
|
|---|
| |