| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_R0033 |
|---|
| Symbol | |
|---|
| ID | 4709373 |
|---|
| Type | rRNA |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | - |
|---|
| Start bp | 952248 |
|---|
| End bp | 953785 |
|---|
| Gene Length | 1538 bp |
|---|
| Protein Length | |
|---|
| Translation table | |
|---|
| GC content | 58% |
|---|
| IMG OID | 640722554 |
|---|
| Product | 16S ribosomal RNA |
|---|
| Protein accession | |
|---|
| Protein GI | |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000378293 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | AGAGTTTGAT CCTGGCTCAG ATTGAACGCT GGCGGCATGC CTAACACATG CAAGTCGAGC
GGCAGCGCGG AGGAGCTTGC TCCTCTGGCG GCGAGCGGCG GACGGGTGAG TAACGCGTGG
GAATTTACCC TTCGGTGGGG GATAGCCCGG GGAAACTCGG ATTAATACCG CATACGCCCT
ACGGGGGAAA GTGGGCCTCT GATTCAAGCT CACGCCGAAG GATGAGCCCG CGTCCGATTA
GCTAGTTGGT GGGGTAAAGG CCTACCAAGG CGACGATCGG TAGCTGGTTT GAGAGGATGA
TCAGCCACAC TGGGACTGAG ACACGGCCCA GACTCCTACG GGAGGCAGCA GTGGGGAATA
TTGGACAATG GGCGAAAGCC TGATCCAGCA ATGCCGCGTG TGTGAAGAAG GCCTGCGGGT
TGTAAAGCAC TTTCATCGGG GAGGAAAAGC GTTGGGTTAA TACCCTGGCG TCTTGACGTT
ACCCGAAGAA GAAGCGCCGG CAAACTTCGT GCCAGCAGCC GCGGTAATAC GAAGGGCGCA
AGCGTTAATC GGAATCACTG GGCGTAAAGG GCGCGTAGGC GGTCAGGTAA GTCGGGTGTG
AAAGCCCTGG GCTCAACCTA GGAATTGCAT CCGATACTGC TTGACTAGAG TTCGGTAGAG
GGTAGTGGAA TTCCCGGTGT AGCGGTGAAA TGCGTAGATA TCGGGAGGAA CACCAGTGGC
GAAGGCGACT GCCTGGACCG AAACTGACGC TGAGGCGCGA AAGCGTGGGT AGCAAACAGG
ATTAGATACC CTGGTAGTCC ACGCCGTAAA CGCTGAGAAC TAGCCGTTGG GCCTATTTAT
AGGCTTAGTG GCGCAGCTAA CGCATTAAGT TCTCCGCCTG GGGAGTACGG CCGCAAGGCT
AAAACTCAAA GGAATTGACG GGGGCCCGCA CAAGCGGTGG AGCATGTGGT TTAATTCGAT
GCAACGCGAA GAACCTTACC GGCCCTTGAC ATCCTCGGAA CCTTCTGGAG ACAGAGGGGT
GCCTTCGGGA GCCGAGTGAC AGGTGCTGCA TGGCTGTCGT CAGCTCGTGT CGTGAGATGT
TGGGTTAAGT CCCGCAACGA GCGCAACCCT TGTCCCTAGT TGCCAGCGGT TCGGCCGGGA
ACTCTAGGGA GACTGCCGGT GACAAACCGG AGGAAGGTGG GGACGACGTC AAGTCATCAT
GGCCCTTATG GGCCGGGCTA CACACGTGCT ACAATGGCGG GTACAGAGGG TTGCCAATCC
GCGAGGTGGA GCTAATCCCT GAAAGCCCGT CCTAGTCCGG ATCGGAGTCT GCAACTCGAC
TCCGTGAAGC AGGAATCGCT AGTAATCGCA GATCAGCAAT GCTGCGGTGA ATACGTTCCC
GGGCCTTGTA CACACCGCCC GTCACACCAT GGGAGTCGGC TGCACCAGAA GTGCGTAGTC
TAACCTTCGG GAGGACGCGT ACCACGGTGT GGTCGGCGAC TGGGGTGAAG TCGTAACAAG
GTAGCCGTAG GGGAACCTGC GGCTGGATCA CCTCCTTT
|
|---|
| Protein sequence | |
|---|
| |