Gene Hhal_R0030 details

Gene Information

• Locus tag: Hhal_R0030
• ID: 4709370
• Type: rRNA
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: -
• Start bp: 948948
• End bp: 951851
• Gene Length: 2904 bp
• GC content: 58%
• IMG OID: 640722551
• Product: 23S ribosomal RNA

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.000445054
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GGCCAAGCGG TTAAGCGCAT ACGGTGGATG CCTAGGCGGC AGGAGGCGAT GAAGGACGTG 
GTAGCCTGCG ATAAGCCTCG GGGAGCCGGC AAACGGGCTT CGATCCGGGG ATTTCCGAAT 
GGGGCAACCC GGCCACCGTC AGGTGGTCAT CGTACGCTGA ATCCATAGGC GTACGAGGCG 
AACCCGGTGA ACTGAAATAT CTAAGTAACC GGAGGAAAAG AAATCAACCG AGATTCCCTT 
AGTAGTGACG AGCGAACGGG GACCAGCCCT TAAGCGATCA GTGTTCTAGT GGAGCGGTCT 
GGAAAGTCCG GCCATAGAAG GTGACAGCCC TGTACACGAA AGGGCGCTGA TCGTGAAATC 
GAGTAGGGCG GGACACGTGT TATCCCGTCT GAAGATGGGG GGACCATCCT CCAAGGCTAA 
ATACTCCCTG CCGACCGATA GTGAACCAGT ACCGTGAGGG AAAGGCGAAA AGAACCCCGG 
TGAGGGGAGT GAAATAGAAC CTGAAACCGT ATGCGTACAA GCAGTGGGAG CCCGGTGCGT 
CCGGGTGACC GCGTACCTTT TGTATAATGG GTCAGCGACT TACTTTCAGT GGCGAGGTTA 
ACCGTTTAGG GGAGCCGTAG GGAAACCGAG TCTTAAATGG GCGTTCAGTC GCTGGGAGTA 
GACCCGAAAC CGAGCGAGCT ACCCATGGCC AGGGTGAAGG CGGGGTAACA CCTGCTGGAG 
GCCCGAACCC ACTAGCGTTG AAAAGCTAGG GGATGAGCTG TGGGTCGGAG TGAAAGGCTA 
AACAAGCTCG GAGATAGCTG GTTCTCCCCG AAAGCTATTT AGGTAGCGCC TCGTGTCTCA 
CTCCCGGGGG TAGAGCACTG TTTCGGCTAG GGGGGCATCC GTGCCTTACC AAACCGAGGC 
AAACTCCGAA TACCGGGAAG TGCAATCACG GGAGACAGAC GGCGGGTGAT AAGGTCCGTC 
GTCAAGAGGG AAACAGCCCA GACCGCCAGC TAAGGCCCCC AAGTCGTGGC TAAGTGGTTA 
ACGATGTGGG AAGGCAGAGA CACCCAGGAG GTTGGCTTAG AAGCAGCCAC CCTTTAAAGA 
AAGCGTAATA GCTCACTGGT CTAGTCGGCC TGCGCGGAAG ATTTAACGGG GCTCAAGCCA 
CGCGCCGAAG CTGCGGATGC TCTTAGAGCA TGGTAGGGGA GCGTTCCGTA CGCCGCTGAA 
GGAGGACCCG TGAGGGCCTC TGGAGGTATC GGAAGTGCGA ATGCTGACAT GAGTAACGAT 
AAAGCGGGTG AAAATCCCGC TCGCCGAAAG CCCAAGGTTT CCTGCGCAAC GCTAGTCGAC 
GCAGGGTTAG CCGGCCCCTA AGGTGAGGCC GAAAGGCGTA GCCGATGGGA AACGGGTTAA 
TATTCCCGTG CCTCTTGTTG CTGCGATGGG GTGACGAAGA AGGCTAGGTC ATCCGGGTGA 
CGGATGTCCC GGTTCAAGCG TGTAGGCGGA GCCCTTAGGC AAATCCGGGG GTTCACACGC 
CGAGACGCGA ACACGACGCT CTACGGAGCG GAAGTGACCG ATGCCAGGCT TCCTAGAAAA 
GCCTCTAAGC TTCAGGCAGC AAGAGACCGT ACCGATAACC AACACAGGTG GGCAGGGTGA 
GAATCCCAAG GCGCCTGAGA GAACCCGGGT GAAGGAATTC GGCAAAATGG CACCGTAACT 
TCGGGAGAAG GTGCGCCTCC GTTATGTGAA GCCCTTTACG GGCGGAGCAG AGGGGGGCCG 
CAGTGACCAG GGGGCTGCGA CTGTTTACTA AAAACACAGC ACTCTGCTAA CTCGCAAGAG 
GATGTATAGG GTGTGACGCC TGCCCGGTGC CGGAAGGTTA AGTGATGGGG TTAGCCCTTC 
GGGGCGAAGC TCTTGATCGA AGCCCCGGTA AACGGCGGCC GTAACTATAA CGGTCCTAAG 
GTAGCGAAAT TCCTTGTCGG GTAAGTTCCG ACCTGCACGA ATGGCGTAAC GATGGCCCCA 
CTGTCTCCAT CCGGGACTCA GTGAAATTGA AATCGCAGTG AAGATGCTGT GTACCCGCGG 
CAAGACGGAA AGACCCCGTG AACCTTTACT ACAGCTTCGC ACTGGACCTC GAGCATGCTT 
GTGCAGGATA GGTGGGAGGC TTTGAAGCGA GCGCGCTAGC TCTCGTGGAG CCATCCTTGA 
GATACCACCC TTGCATGTTT GGGGTTCTAA CCTGGGCCCG TCATCCGGGT CGGGGACCGT 
GCGTGGTAGG TAGTTTGACT GGGGCGGTCT CCTCCCAAAG AGTAACGGAG GAGCGCGAAG 
GTACCCTCAG CGCGGTCGGA AATCGCGCAG TGCGTGTAAA GGCAGAAGGG TGCTTGACTG 
CGAGACCTAC AAGTCGAGCA GGGGCGAAAG CCGGCCTTAG TGATCCGGTG GTTCTGTATG 
GAAGGACCAT CGCTCAACGG ATAAAAGGTA CTCCGGGGAT AACAGGCTGA TTCCTCCCAA 
GAGTCCACAT CGACGGAGGA GTTTGGCACC TCGATGTCGG CTCATCACAT CCTGGGGCTG 
TAGCAGGTCC CAAGGGTACG GCTGTTCGCC GTTTAAAGTG GTACGCGAGC TGGGTTTAGA 
ACGTCGTGAG ACAGTTCGGT CCCTATCTGC CGTGGGCGTC GGAGACTTGA GAGGCTCTAC 
TCCTAGTACG AGAGGACCGG AGTGGACATA CCGCTGGTGT TCCGGTTGTC ACGCCAGTGG 
CACAGCCGGG TAGCTACGTA TGGAAGGGAT AACCGCTGAA AGCATCTAAG CGGGAAGCCC 
GCCTCAAGAT CAGGTCTCCC TGGACCCTCG AGGTCCCTAA AGGGCCGTCC AAGACGAGGA 
CGTTGATAGG CGGGGTGTGG AAGTGCAGCA ATGCATTAAG CTAACCCGTA CTAATGGCCC 
GTGAGGCTTG GCCATATAAC ACCC 

 

Protein sequence