Gene Hhal_2438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2438 
Symbol 
ID4710031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2676727 
End bp2677620 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content70% 
IMG OID639856914 
ProductparB-like partition proteins 
Protein accessionYP_001004003 
Protein GI121999216 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.291744 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAACA AGAAGCGTGG TCTCGGCCGC GGCCTGGATG CCCTGCTCGG TGCCGAGCCC 
GGCGCCGTCG CCGCCGGTCA CCCGGTGGAT GGCGGCGAGC TTCGCGATCT GCCCGTCGAT
CTGCTTGAAC GCGGCCCCCA CCAGCCGCGC CGCCACTTCG ACGATCAGGC CCTCCAGGAG
CTGGCCGACT CCATCCGCGC CCAGGGCGTC GTCCAGCCGC TGGTGGTGCG CCCGACGGAT
ACCGGACGCT TCGAGATCAT TGCTGGCGAG CGACGCTGGC GGGCGGCTCA GCGTGCTGGG
ATTGATACGG TGCCCGCGCT GGTTCGCGAC ATCCCCGACG AGGCGGCCAT CGCCGTCGGC
CTGATCGAGA ACCTGCAGCG TGAAGACCTC AACCCGCTGG AGGCCGCCGG CGCGCTGCAG
CGGCTGATTC ACGAGTTCGG GCTGTCCCAT CAAAAAACCG CGGACGCCGT CGGGCGATCC
CGCACATCGG TGACCAACCT GCTGCGGCTG CTCGAGCTCA ACGAGGACGT TCAGCGGTTG
ATCAGCGAGG GACGCCTGGA GGCGGGGCAC GCCAAGGCGC TTGCTGGCCT GACCGGCACG
GCCCAGAGCG AGGCGGCTGC CCGGGTGGCC CGTGACCACC TCACCGTGCG TCAGACCGAG
ACCCTGGTAC GGCGCTATCA GCAGGCAGCC GACACCTCCG CCGACGACGC CAAAGGGGCG
GCGGGGGAGG GCAAGCGCCT GGATCCCGAC GTCGAGCGCC TGCGCGATAC GCTCGCCGAC
CGCCTCGGCG CGCCGGTGGA TATCCAGCAC AGTCGCCGCC AGGGCAAGGG GCGTCTGGTC
ATCCGCTACA GCAGCCTCGA GGAGCTGGAC GGTATCCTCG GACGTATCCA TTGA
 
Protein sequence
MSNKKRGLGR GLDALLGAEP GAVAAGHPVD GGELRDLPVD LLERGPHQPR RHFDDQALQE 
LADSIRAQGV VQPLVVRPTD TGRFEIIAGE RRWRAAQRAG IDTVPALVRD IPDEAAIAVG
LIENLQREDL NPLEAAGALQ RLIHEFGLSH QKTADAVGRS RTSVTNLLRL LELNEDVQRL
ISEGRLEAGH AKALAGLTGT AQSEAAARVA RDHLTVRQTE TLVRRYQQAA DTSADDAKGA
AGEGKRLDPD VERLRDTLAD RLGAPVDIQH SRRQGKGRLV IRYSSLEELD GILGRIH