Gene Hhal_2428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2428 
Symbol 
ID4710798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2668188 
End bp2669609 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content71% 
IMG OID639856904 
ProductUDP-N-acetylglucosamine pyrophosphorylase 
Protein accessionYP_001003993 
Protein GI121999206 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1207] N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) 
TIGRFAM ID[TIGR01173] UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.127202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGGCAC CTGTTGCCGT GGTCATACTG GCTGCGGGCA AAGGGACCCG CATGCGCTCG 
GCCCAGCCTA AGGTTCTGCA ACCGCTGGCT GGGCGCCCCC TGCTTGCCCA CGTCCTGGAT
ACGGCCCTGG CCCTGGGGCC GGAGCAGGTT CACGTGGTCT ACGGCCACGG CGGCGATCAG
GTCGCCGCCG CGCACGCCGA TTACCCGGTC TACTGGGTTG AACAGCCCCG CCAACTCGGG
ACCGGGCACG CGGTGGCGTG CGCGCTGCCG CAGATCCCGG ACGATCACCG GGTGCTGGTC
CTCTATGGTG ACGTCCCCCT GGTCACCCCT GAGACCCTCA AACCCCTGCT TGCCGGAGAT
GGACTGGAAC TCCTGGCAGC CCGGGTCCCG GACCCGACCG GTTACGGCCG CATCATCCGT
GATGACGACG GCGCCGTGGT GGCCATCGTC GAGGAAAAGG ACGCCGACCC GGAGCAGCGT
CGCGTCGATG AGGTCAACAC CGGCCTTCTG GCCGCATCGG CCGGTGATCT GCGTCGCTGG
ATGGCCGCTC TGTCCGCCGA CAACGCCCAG GGCGAGTACT ACCTGACCGA TGCGGTGGCG
GCGGCGAGGG CGGACGGCAC CCCGGTGCGT GCCCGGTTCA CGAGCGAGGC CGGCGAAGCC
AGCGGCATCA ACGACCTGGT CCAGCTCGCG GAGGTGGAAG AGGCGTTCCA GCGACGCTGG
GCGCGGCGCC TGCTGCAGGG AGGGCTGCGC CTGGTAGCGC CGCACCGGTT CACCCTGCGT
GGTGCGGTCC GCCACGGTAC CGACTGCGCT GTGGACGCTG ACTGCACCCT GGAGGGCGAA
GTGCAGCTGG GCCATGGGGT GCAGGTCGGC CAAGGGGTGA TCCTGCGCGA CTGCGTGATC
GAGGACGGGG CCCAAGTCGG CCCCTATACT GTGGTCGAGC AAGCCCACAT TGGCGCAGGG
TGCCGCGTCG GCCCCTTCGC CCATCTGCGT CCAGGGACCG TGCTCGAGGA GGGCGCCCGG
GTGGGAAATT TCGTCGAGAC CAAGGCAGCC CGCCTGGGCC CTGGCGCAAA GGCCAACCAC
CTGACCTACG TCGGAGACGC CGAGGTCGGG GCCCGGGCCA ACCTGGGGGC CGGCACCATC
ACCTGCAACT ACGACGGGGC CGAGAAGCAC CGTACGCAGA TTGGTGAGGA TGCCTTCATC
GGCTCCGGGA GCCAGCTGGT CGCGCCGGTC CAGGTGGGGG CGCGGGCGAC CATCGGCGCC
GGGACCACCC TGACCAGCGA TGCGCCGGCC GACGCCCTCA CCGTGGGCCG CAGCCGCGCC
CGGACCATCC CCGGCTGGCA GCACCCCGGC TTGACGGGCC GTCGCGGACC TCCCGATGAT
AACGATGCGA CGCCGGCGTC CGGCGGTGCC AAGGAAGAGT AA
 
Protein sequence
MRAPVAVVIL AAGKGTRMRS AQPKVLQPLA GRPLLAHVLD TALALGPEQV HVVYGHGGDQ 
VAAAHADYPV YWVEQPRQLG TGHAVACALP QIPDDHRVLV LYGDVPLVTP ETLKPLLAGD
GLELLAARVP DPTGYGRIIR DDDGAVVAIV EEKDADPEQR RVDEVNTGLL AASAGDLRRW
MAALSADNAQ GEYYLTDAVA AARADGTPVR ARFTSEAGEA SGINDLVQLA EVEEAFQRRW
ARRLLQGGLR LVAPHRFTLR GAVRHGTDCA VDADCTLEGE VQLGHGVQVG QGVILRDCVI
EDGAQVGPYT VVEQAHIGAG CRVGPFAHLR PGTVLEEGAR VGNFVETKAA RLGPGAKANH
LTYVGDAEVG ARANLGAGTI TCNYDGAEKH RTQIGEDAFI GSGSQLVAPV QVGARATIGA
GTTLTSDAPA DALTVGRSRA RTIPGWQHPG LTGRRGPPDD NDATPASGGA KEE