| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_2418 |
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| Symbol | |
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| ID | 4710037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 2654191 |
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| End bp | 2655930 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 639856894 |
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| Product | ABC transporter, transmembrane region, type 1 |
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| Protein accession | YP_001003983 |
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| Protein GI | 121999196 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
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| TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0870797 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCGGTGG CCGATGAACC CCGCGGCGGC GAGCGGGCGG CGGGGCGCTG GCTGCTCGAC
CAGGCCCGCC AGGCCCGCCC CGCGATGGCC GCGACGGTCG GTGCGGGCCT GGCGGACACG
GTCCTGGTCG TCCTCCAGGC ACTGCTCATC GCCTGGGTCA TCGATCAGGC GGTCATCCGC
GCCACCCCGC TCGCTGAGCT TTGGGGGGCA CTGGCCCTGC TGGCTGCGGT CTTCGCGGCC
CGGGCCGGTG CCACCTGGGC GCGGGCGGCG GCCGGTGCCC GCGCCGCCTG GGTCATCACC
GCAGCCGTCC GCCGACGGCT CTACCGCCAC ATCGCCGCCC TCGGCCCAGT GCGCCTGCAG
GGCCACCACA GCGGGGCCGT GGCCAGCGCC CTGGTCGAGC AGGTCGAGGC CCTGGAGGGC
TACTACGCCC ACTACCTGCC GCAGATGGTG CTGGCAGTGG TCGCCCCGTT GGTGTTCATC
GCCCTGATCA CCGGCGTCGA CCTGCTTGCC GGGCTGCTGC TGCTCATCGC TGCGCCGCTG
GTGCCGCTGT TCATGGCGCT GGTGGGGATG GGGGCGGCGC GTCTGTCCCG GCGTCAGCAG
CAGAGCCTGG CCCGGATCAG TGCGCACTTC CTCGATCGCC TGCGCGGCCT GGCCACGCTG
CGTATCTTCC GCGCCACCGA TGCCGCCGCC GAGGCGGTGG AGGGGGCCGC TGAGGAGTAC
CGGCGCCGGA GCCTGTCGGT CCTGCGCGTG GCCTTCCTCT CCTCGGCGGC GCTCGAGCTG
ATCGCCGCCA TCTCCATCGC CCTGGTGGCG ATCTACGTCG GTTTCTCCCT GCTCGGTTAT
CTGCACTTCG GTCCCGGGCC GGAGCTGGGC CTGTTCGCCG GGCTGTTCAT CCTGCTCCTT
GCCCCGGAGG TCTTCTTCCC TCTGCGCCGC CTGGCGCAGC ACTACCACGA TCGGGCCGCC
GCCGTGGGGG CCGCCGCGGA GATCCTGGAA CTGCTCGAGG ACCCCCTCCC GGCGGCGGAC
GAGCCCGCCC CGGCGGCGCC CGGCCCGGTG CGACGCGATC CGCAGACCGA CCTGCCGGTG
CCCGACCCCC GGCCCCTCGG CTTCCACCGG GTTACCGTCG CCTTCCCCGG GGCGGAGGCG
CCGGCGCTCG ACGGCCTGGA GCTGCACATC CCCGCCGGCC AGCGGGTGGT CATCTCCGGC
CCCAGCGGTG CCGGCAAGTC GACCCTGCTG CACCTGGCTG CGGGTTTCCT CCGCCCCGAC
ACCGGTCGCG TGACCATCGG GGAGTCGGCG CCAGCGGCGG GGGCGGTGGC CTGGGTGGGG
CAGCGGCCGT GGCTGTTCCA CGGCAGCGTG CGCGAAAACC TGCAGCTGGC CGACCCCGGG
GCCGACGACC GGCGGTTGAG GGCTGCCTTG CGCCACGCGG ACCTCGACGG GGTCATCGCC
GCCCTTCCGG AGGGGCTCGA CACCCCGCTG GGGGAGGACG CGTACGGCCT CTCCGGCGGA
CAGGCCAGCC GTCTGGCGCT GGCCCGGGCG CTGCTCTCCG GGGCCCCGGT GCTGCTCCTC
GACGAGCCCA CTGCCGGCCT CGACCCGGAC AGCCGCGAGC GCGTCCTGGC AGCCGTCGCC
CGACTGGCCG ACGGTCGGCG CACGGTGCTG ATGGTCGCCC ACGACCGAGA CACCCACGAC
TGGGGGGATC GCCACCTGGT GATCGAGGCC GGCCGCTGCG TGGAGGATCG CCGTGCGTGA
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| Protein sequence | MPVADEPRGG ERAAGRWLLD QARQARPAMA ATVGAGLADT VLVVLQALLI AWVIDQAVIR
ATPLAELWGA LALLAAVFAA RAGATWARAA AGARAAWVIT AAVRRRLYRH IAALGPVRLQ
GHHSGAVASA LVEQVEALEG YYAHYLPQMV LAVVAPLVFI ALITGVDLLA GLLLLIAAPL
VPLFMALVGM GAARLSRRQQ QSLARISAHF LDRLRGLATL RIFRATDAAA EAVEGAAEEY
RRRSLSVLRV AFLSSAALEL IAAISIALVA IYVGFSLLGY LHFGPGPELG LFAGLFILLL
APEVFFPLRR LAQHYHDRAA AVGAAAEILE LLEDPLPAAD EPAPAAPGPV RRDPQTDLPV
PDPRPLGFHR VTVAFPGAEA PALDGLELHI PAGQRVVISG PSGAGKSTLL HLAAGFLRPD
TGRVTIGESA PAAGAVAWVG QRPWLFHGSV RENLQLADPG ADDRRLRAAL RHADLDGVIA
ALPEGLDTPL GEDAYGLSGG QASRLALARA LLSGAPVLLL DEPTAGLDPD SRERVLAAVA
RLADGRRTVL MVAHDRDTHD WGDRHLVIEA GRCVEDRRA
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