| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_2407 |
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| Symbol | |
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| ID | 4709788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 2642160 |
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| End bp | 2643404 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639856883 |
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| Product | ammonium transporter |
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| Protein accession | YP_001003972 |
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| Protein GI | 121999185 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0004] Ammonia permease |
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| TIGRFAM ID | [TIGR00836] ammonium transporter
[TIGR03644] probable ammonium transporter, marine subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGACG TAGTCGAACT TGCCTACGCC CTCGATACCT TCTACTTCCT GCTCTCGGGC
GCACTGGTCA TGTGGATGGC CGCCGGCTTC ACCATGCTCG AGGCGGGTAT GGTGCGCGCC
AAGAACACCA CCGAGATCCT CACCAAGAAC ATCGGGCTCT ACTCCATCGC GGTGATCATG
TACATGCTCA TCGGCTGGAA CCTGATGTAC GAGAGCTCGG GCAGCCTGCT GCCCACCTTC
AGCTTCCTGC TGCCCGCCTC GGAGCCGGTC ACGGCCGAGA TGGCGCGCAG CGGCGAGGCC
ACCGAGTCCT ACTTCTCGGA CTTCTTCTTC CAGGTGGTCT TCGTCGCCAC GGCCATGTCC
ATCGTCTCCG GCGCCGTCGC CGAGCGCATG AAGCTCTGGT CTTTCCTGAT CTTCGCGGTG
GTGCTCACCG GCTTTATCTA CCCCATCCAG GGGCTGTGGA GCTGGGGCGG CGGCTTCCTC
GATCAGATGG GCTTTTCGGA CTTTGCCGGC TCGGCCATCG TCCACATGGC CGGCGCGTCG
GCGGCCCTGG CCGGTGTTCT GGTCCTGGGC GCCCGCAAGG GCAAATACGG CCCCCGCGGC
GAGGTACGCG CCATCCCCGG CGCCAACCTG CCGCTGGCCA CGTTGGGCAC CTTCATCCTC
TGGCTCGGCT GGTTCGGGTT TAACGGCGGC TCGGAGCTGT CGGTCTCCTC GGCGGGTGCA
GCCAACGCGG TAGCCACCAT CTTCATGAAC ACCAACCTGG CCGCCGCCGG CGGTGTGGTC
GCCGCCCTGC TGCTGGCCCG CGCCCTGTTC GGCAAGGCCG ACCTGACCAT GGCCCTCAAC
GGCGCCATCG CCGGTCTGGT CTCCATCACC GCCGGGCCGG ACACCCCGTC GCCGCTGCTG
GCCGCGTTCA TCGGTGGTGT CGGTGGTGTT CTGGTGGTCT TCTCCATCGT CGCCCTCGAT
AAGCTGAAGA TCGACGACCC GGTGGGCGCC ATCTCGGCCC ACGGCACGGC GGGCATCTGG
GGCATCCTGG CGGTGCTGCT CTCCAACCCG GACGCCACCT TCGGTGCCCA GATCGCCGGG
CTGCTATCGA TCTTCACCTT TGTCTTCCTG GCCAGCCTGG TCGTCTGGCT GATCCTGCGC
TTCACCCTGG GGATCCGCGC CAGCGAAGAG GACGAGCAGA AGGGCATGGA CGTGACCGAG
TGCGGGATGG AGGCCTACCC GGACTTCACC GCCGGTCGCA AGTAG
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| Protein sequence | MEDVVELAYA LDTFYFLLSG ALVMWMAAGF TMLEAGMVRA KNTTEILTKN IGLYSIAVIM
YMLIGWNLMY ESSGSLLPTF SFLLPASEPV TAEMARSGEA TESYFSDFFF QVVFVATAMS
IVSGAVAERM KLWSFLIFAV VLTGFIYPIQ GLWSWGGGFL DQMGFSDFAG SAIVHMAGAS
AALAGVLVLG ARKGKYGPRG EVRAIPGANL PLATLGTFIL WLGWFGFNGG SELSVSSAGA
ANAVATIFMN TNLAAAGGVV AALLLARALF GKADLTMALN GAIAGLVSIT AGPDTPSPLL
AAFIGGVGGV LVVFSIVALD KLKIDDPVGA ISAHGTAGIW GILAVLLSNP DATFGAQIAG
LLSIFTFVFL ASLVVWLILR FTLGIRASEE DEQKGMDVTE CGMEAYPDFT AGRK
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