Gene Hhal_2393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2393 
Symbol 
ID4710162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2629432 
End bp2630265 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content68% 
IMG OID639856868 
Productendonuclease/exonuclease/phosphatase 
Protein accessionYP_001003958 
Protein GI121999171 
COG category[R] General function prediction only 
COG ID[COG3568] Metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAACA TCTCCTACCG GCTGCGCGAG GGGGCCTACG CCACCCTCCA CCCCACGCTC 
TCGCCCGAGG CGCCGGCCAC CATTCGAGTG GTCAGCTACA ACATCCAGAA CGCCATCGCC
ACCTCGCGCT ACCACCACTA CTTCACGCGG GGCTGGAAGC ACGTGCTCCC GGACCGCCAG
CGACAGGGGA ATCTGGAGCG CATCGGCGGC TGGATCGAGC CCTACGACCT GGTCGGGCTG
CAGGAGGTGG ACGCCGGGAG CTTCCGGACC GGGTTCATGA ACCAGGTGGA GCACCTGGCC
TACAAGGCGG ACTTCCCCTA CTGGTACATC CAGACCAACC GCAACATGGG CCGCCTGGCG
CAGCAGAGCA ACGGGCTGCT GGCCCGCTAC CGGCCGGCAG AGATCCGCGA GCACCGGCTG
CCCGGTCTGA TCCCCGGGCG CGGGGCGCTG CAGATCCGTT TCGGGTCCGG TAGCGAGGCG
CTCAACGTCA TCCAGGTGCA CATGGCCCTG GGACGACGCA CCCGGATGCG GCAGATGGAC
TTCCTGGCCG AGCTGGTCAA CGCCCACCGG CACATCATCG TGATGGGCGA TCTCAACTGC
CAGGCGGACA GCCCCGAGCT GCTCCGCCTC GGCCGGCGCA CAGACCTCTC CGAGCCCATC
CACGGCCTGC ACACCTTCCC CAGCTGGCGC CCGAAGCACA ATATCGATCA CATCCTGATC
AGCTCCACAC TGCAGGTGCA GCGGGCCCGG GTCCTGGAAC ACGCGCTCTC CGACCATCTG
CCGATCGCCA TGGAGCTGGC CCTGCCCGAG GCGGTCCGCC TGCCTGCGGC ATAA
 
Protein sequence
MTNISYRLRE GAYATLHPTL SPEAPATIRV VSYNIQNAIA TSRYHHYFTR GWKHVLPDRQ 
RQGNLERIGG WIEPYDLVGL QEVDAGSFRT GFMNQVEHLA YKADFPYWYI QTNRNMGRLA
QQSNGLLARY RPAEIREHRL PGLIPGRGAL QIRFGSGSEA LNVIQVHMAL GRRTRMRQMD
FLAELVNAHR HIIVMGDLNC QADSPELLRL GRRTDLSEPI HGLHTFPSWR PKHNIDHILI
SSTLQVQRAR VLEHALSDHL PIAMELALPE AVRLPAA