Gene Hhal_2387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2387 
Symbol 
ID4709715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2624409 
End bp2624933 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content68% 
IMG OID639856862 
Productgeneral secretion pathway M protein 
Protein accessionYP_001003952 
Protein GI121999165 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3149] Type II secretory pathway, component PulM 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCCGCG AGGCGCTGCA GCAGCTCCGC GCCGAGGCTG AACGCTTCTG GTCGGCGCGT 
AACCCTCGGG AACGCTGGCT GCTGGGTAGC GGCGGCTTGC TGGTGCTGGT GGTGGTGCCG
TACGTGGCGG TTTGGGAGCC GTTGACCGAG CGTCGGGACC AGCTCCAAGC TCAGGTCGCC
GAGCAGCGCC AGGATCTGGC CTGGATGCGC TCGGCCGCGG AAGAGATCCA CGCCCATGAT
GGGGATAACG GTTCGGCAGA GCCGGTCACC GACGAGCGAT CCCTGCTCAG CCTGGTGGAT
CGGGCCGCCC GGGAGGCCGG GATCGATGAT CAGCTCAGCC GGGTGCAGCC GGACGGGGAT
GGCACCCTCC GGGTGTGGAT GGACCGGGTC CCCTTCGATG AGCTCATGAA CTGGCTCGAC
GGCCTGCAGC GCGCCGCCGG CGTTGAGGTA GATGCCTTGA CTGTGGAGCG GACGCAAGAG
GACGGCTTGG TCAACGTGCG CCTGACCCTG GAGGTGGGCA CGTGA
 
Protein sequence
MIREALQQLR AEAERFWSAR NPRERWLLGS GGLLVLVVVP YVAVWEPLTE RRDQLQAQVA 
EQRQDLAWMR SAAEEIHAHD GDNGSAEPVT DERSLLSLVD RAAREAGIDD QLSRVQPDGD
GTLRVWMDRV PFDELMNWLD GLQRAAGVEV DALTVERTQE DGLVNVRLTL EVGT