Gene Hhal_2383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2383 
Symbol 
ID4709080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2620516 
End bp2621970 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content71% 
IMG OID639856858 
Productsignal transduction histidine kinase, nitrogen specific, NtrB 
Protein accessionYP_001003948 
Protein GI121999161 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0311727 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGTCC GGCTCGGCGC CACCTTCCTG CTGGTGACCC TGATGGTCGC CCTGCCGCTG 
ACGCTGTGGT TCGACCACTA CGCGAGGGGC ATGATCGAGG CCGGCGTCGA GCGCGCCGTC
GAGGGGGCCG ACGCGCGGGT CATCCTCGAC GCCGCGGTGG TCTCGGAGGC TTTCGATCGC
GTGCGCGGCC TGGCGCTGCT GGTGGTGGGG CTCAGCGCCC TGCTGGCCGC CGGCGTCGGG
GCGCTGATCG CGGCGCGCTG GCGGACGCGG ATGCGCAGTA TCGTCGAGCA GGGCCACCGC
CGTGCCCGGC GCGCCCAGGG CGACGGCAAG CAGCCCGCGC GCTGCCCCGG CACACCCCGG
CCACGCCCCG GCGAGGACGA ACTGGACGCC GTCGAGCGGC AACTGCTCAA CACCGTCGAC
CAGCTGGGCC GCTCGCAGTG GCTGCTCGAC AGCGTCGAGG ACCTGGTGAT GCTGGTCGAC
GCCGATGGCA CCATCCGCCA CGGTAACGCC GCCATCGGCA CACACTGCGC GAGTTGTCCG
GTTCCCGACT GCATGGGGGC CACGGTGCCG GATCTCCTCG GCGGCGGACT GTGGCTGCGC
ATCCGCACCG GGATCGAGCG CGCCGAGACC GGGACCTTCG AGCAGGAGGT GCGGCTGGAC
GGGCGGTCCT GGCCGGCCCT GGTCTCCTAC CGCCGTCTCG GGGAGCTGAC CCTGGTCAAG
ATCACCGACC TGAGCGAGTA CCGCCGGCTG AACGAACATC TGGAGAAGCT CCAGGCCCTC
TCCACCCTGG GCGAGATGTC CACCGAGCTG GCCCACGACA TCAAGAACAG CATCGTGCCG
GTGCGCCTGC TCTGCGAGGT GGCCCCGCTG GAGGCCGAAG ACCGGCAGGC GATCTTCCGC
TCGCTGGATC ACATCCACGA GCTGGTCAAT GACTTTATGG CCTTCGGCTG CGGGCGCAGC
AGCGAACCGC GCAGCGGCGC TCTCACCGAG ATCCTGCAGA GCTGGACCAC GGTCCTGCGC
AACGAGGCCC AGGCCAAGGG CGTCTCCCTG ACGGCGGCGT TCGCCGACGC GCGGGTCGAA
CTGCCGGGGG GCTTTCGGAT CGTCTACGCC AACCTGGTGC GCAACGCGGT CCAGGCCGTA
CCCGCCGGCG GCCAGGTGTG GGTGGACGCC CGAGTGGATC GCCGCGACAC CCTGGTGCTG
CAGGTGGCGG ACAACGGCCC GGGCATCCCC GAGGCGCTAC GCGAGCGGCT GTTCGAGCCC
TTTGCCACCA GTCGCGCCGA CGGCACTGGG CTGGGACTGC CACTGGTCCA GCGCTATGTG
CAGGAGGCCG GCGGTGAGGT GGTCTGCGAC TCCACCCCCG GCACCGGGAC CAGTTTCACG
GTCCACTGGC CGGGGGCCGG GGAAACCACA GGCCGTACAC TCACCCACCA CGCCGGGATC
GCCTCTGCGG GCTGA
 
Protein sequence
MAVRLGATFL LVTLMVALPL TLWFDHYARG MIEAGVERAV EGADARVILD AAVVSEAFDR 
VRGLALLVVG LSALLAAGVG ALIAARWRTR MRSIVEQGHR RARRAQGDGK QPARCPGTPR
PRPGEDELDA VERQLLNTVD QLGRSQWLLD SVEDLVMLVD ADGTIRHGNA AIGTHCASCP
VPDCMGATVP DLLGGGLWLR IRTGIERAET GTFEQEVRLD GRSWPALVSY RRLGELTLVK
ITDLSEYRRL NEHLEKLQAL STLGEMSTEL AHDIKNSIVP VRLLCEVAPL EAEDRQAIFR
SLDHIHELVN DFMAFGCGRS SEPRSGALTE ILQSWTTVLR NEAQAKGVSL TAAFADARVE
LPGGFRIVYA NLVRNAVQAV PAGGQVWVDA RVDRRDTLVL QVADNGPGIP EALRERLFEP
FATSRADGTG LGLPLVQRYV QEAGGEVVCD STPGTGTSFT VHWPGAGETT GRTLTHHAGI
ASAG