Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_2383 |
Symbol | |
ID | 4709080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | + |
Start bp | 2620516 |
End bp | 2621970 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639856858 |
Product | signal transduction histidine kinase, nitrogen specific, NtrB |
Protein accession | YP_001003948 |
Protein GI | 121999161 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0311727 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGTCC GGCTCGGCGC CACCTTCCTG CTGGTGACCC TGATGGTCGC CCTGCCGCTG ACGCTGTGGT TCGACCACTA CGCGAGGGGC ATGATCGAGG CCGGCGTCGA GCGCGCCGTC GAGGGGGCCG ACGCGCGGGT CATCCTCGAC GCCGCGGTGG TCTCGGAGGC TTTCGATCGC GTGCGCGGCC TGGCGCTGCT GGTGGTGGGG CTCAGCGCCC TGCTGGCCGC CGGCGTCGGG GCGCTGATCG CGGCGCGCTG GCGGACGCGG ATGCGCAGTA TCGTCGAGCA GGGCCACCGC CGTGCCCGGC GCGCCCAGGG CGACGGCAAG CAGCCCGCGC GCTGCCCCGG CACACCCCGG CCACGCCCCG GCGAGGACGA ACTGGACGCC GTCGAGCGGC AACTGCTCAA CACCGTCGAC CAGCTGGGCC GCTCGCAGTG GCTGCTCGAC AGCGTCGAGG ACCTGGTGAT GCTGGTCGAC GCCGATGGCA CCATCCGCCA CGGTAACGCC GCCATCGGCA CACACTGCGC GAGTTGTCCG GTTCCCGACT GCATGGGGGC CACGGTGCCG GATCTCCTCG GCGGCGGACT GTGGCTGCGC ATCCGCACCG GGATCGAGCG CGCCGAGACC GGGACCTTCG AGCAGGAGGT GCGGCTGGAC GGGCGGTCCT GGCCGGCCCT GGTCTCCTAC CGCCGTCTCG GGGAGCTGAC CCTGGTCAAG ATCACCGACC TGAGCGAGTA CCGCCGGCTG AACGAACATC TGGAGAAGCT CCAGGCCCTC TCCACCCTGG GCGAGATGTC CACCGAGCTG GCCCACGACA TCAAGAACAG CATCGTGCCG GTGCGCCTGC TCTGCGAGGT GGCCCCGCTG GAGGCCGAAG ACCGGCAGGC GATCTTCCGC TCGCTGGATC ACATCCACGA GCTGGTCAAT GACTTTATGG CCTTCGGCTG CGGGCGCAGC AGCGAACCGC GCAGCGGCGC TCTCACCGAG ATCCTGCAGA GCTGGACCAC GGTCCTGCGC AACGAGGCCC AGGCCAAGGG CGTCTCCCTG ACGGCGGCGT TCGCCGACGC GCGGGTCGAA CTGCCGGGGG GCTTTCGGAT CGTCTACGCC AACCTGGTGC GCAACGCGGT CCAGGCCGTA CCCGCCGGCG GCCAGGTGTG GGTGGACGCC CGAGTGGATC GCCGCGACAC CCTGGTGCTG CAGGTGGCGG ACAACGGCCC GGGCATCCCC GAGGCGCTAC GCGAGCGGCT GTTCGAGCCC TTTGCCACCA GTCGCGCCGA CGGCACTGGG CTGGGACTGC CACTGGTCCA GCGCTATGTG CAGGAGGCCG GCGGTGAGGT GGTCTGCGAC TCCACCCCCG GCACCGGGAC CAGTTTCACG GTCCACTGGC CGGGGGCCGG GGAAACCACA GGCCGTACAC TCACCCACCA CGCCGGGATC GCCTCTGCGG GCTGA
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Protein sequence | MAVRLGATFL LVTLMVALPL TLWFDHYARG MIEAGVERAV EGADARVILD AAVVSEAFDR VRGLALLVVG LSALLAAGVG ALIAARWRTR MRSIVEQGHR RARRAQGDGK QPARCPGTPR PRPGEDELDA VERQLLNTVD QLGRSQWLLD SVEDLVMLVD ADGTIRHGNA AIGTHCASCP VPDCMGATVP DLLGGGLWLR IRTGIERAET GTFEQEVRLD GRSWPALVSY RRLGELTLVK ITDLSEYRRL NEHLEKLQAL STLGEMSTEL AHDIKNSIVP VRLLCEVAPL EAEDRQAIFR SLDHIHELVN DFMAFGCGRS SEPRSGALTE ILQSWTTVLR NEAQAKGVSL TAAFADARVE LPGGFRIVYA NLVRNAVQAV PAGGQVWVDA RVDRRDTLVL QVADNGPGIP EALRERLFEP FATSRADGTG LGLPLVQRYV QEAGGEVVCD STPGTGTSFT VHWPGAGETT GRTLTHHAGI ASAG
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