| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_2375 |
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| Symbol | |
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| ID | 4709256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 2608729 |
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| End bp | 2609400 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639856850 |
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| Product | general secretion pathway protein J |
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| Protein accession | YP_001003940 |
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| Protein GI | 121999153 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4795] Type II secretory pathway, component PulJ |
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| TIGRFAM ID | [TIGR01711] general secretion pathway protein J
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.69272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAGC GTCGCCAGCG CGGCTTCACC CTCCTTGAGC TCCTCGTCGC CGTCGCCATC
TTCGCCGTGG TCTCGGCGAT GGCCTATGGC GGCCTGCGGA CCGTGCTGGA GACCCGCGAC
CGAGTCGAGG CGGAGGGGCA ACGGCTCGGC GAACTGCAAC TGGCCCAGGG GGTCCTCGCC
CGGGATCTGC GTCAGCACCT GGATCGGCCG TGGATCGACG CCTGGGGCGA CCGGCGTCCG
GCACTGGCCT ACGATGCCCT GGATGCCGAG CCCCGCCTGG AGCTGATCAC CGCGGCAGGC
CGTGAAGGCA CGCAGCAGAG CGTATTGCGC CGGGTCGGTT ACGAGTTGGA GGATGGCGTC
CTGTACCGCC TGGGCTGGAC CACCCTGGAC GGTGGCGGGG AGGATCCGCA GACGCGCAGC
CGGCTGGCCG GCACCACGGA GGACGAAAGC CGGAGGCGGA TCGAAGCCAT CCGCTTCACC
TTTCACTATC AGGACCCGGA CGGCACCCTT CAGGAGACCG ACCGCTGGCC ACCGGACGCT
GCACTCGGCG AGGCCGGCCA GCTCCTGGCG CTCGGGGTGA CCCTGGAACT GGGCAACGGG
GAAGAGATCC CACGCCTCCT CTCGGCACGG GGCATGGACC ATGGCAACGG AACAGACGCA
GATCTGGATT GA
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| Protein sequence | MTERRQRGFT LLELLVAVAI FAVVSAMAYG GLRTVLETRD RVEAEGQRLG ELQLAQGVLA
RDLRQHLDRP WIDAWGDRRP ALAYDALDAE PRLELITAAG REGTQQSVLR RVGYELEDGV
LYRLGWTTLD GGGEDPQTRS RLAGTTEDES RRRIEAIRFT FHYQDPDGTL QETDRWPPDA
ALGEAGQLLA LGVTLELGNG EEIPRLLSAR GMDHGNGTDA DLD
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