Gene Hhal_2372 details

Gene Information

• Locus tag: Hhal_2372
• ID: 4710063
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: +
• Start bp: 2607342
• End bp: 2607776
• Gene Length: 435 bp
• Protein Length: 144 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 639856847
• Product: general secretion pathway protein G
• Protein accession: YP_001003937
• Protein GI: 121999150
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2165] Type II secretory pathway, pseudopilin PulG
• TIGRFAM ID: [TIGR01710] general secretion pathway protein G; [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.411005
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAACCG TTCAACCGAG ACGATCGCGC GGCTTTACCC TCATCGAGAT CATGGTGGTG 
GTGGTGATCC TCGGCATCCT CGCCGGAATC GTCGTCCCCC GGATCATGGA CCGTCCGGAT 
AGCGCCCGGG TGGAAGCCGC CAAGCAGGAC ATCCGGGCCA TCGAGTCGGC CCTGAACCTC 
TATCGCCTGG ACAACAACCG TTACCCGAGC ACCGATCAGG GGCTCGAGGC CCTGGTGGAG 
GAACCCAGCG GCGACCCGGA GCCGCAGAAC TGGCAGGGCT ACCTGGACAG CGTCCCCACC 
GACCCGTGGG GGAACGAGTA CCAATACATG AACCCGGGCG AGCACGGCGA CATCGATATC 
TACAGCCTCG GTGCCGACGG CAGCCCCGGG GGCGAGGGCG TGGATGCCGA GATCGGCAAC 
TGGGACGTGG ACTGA 

 

Protein sequence

MTTVQPRRSR GFTLIEIMVV VVILGILAGI VVPRIMDRPD SARVEAAKQD IRAIESALNL 
YRLDNNRYPS TDQGLEALVE EPSGDPEPQN WQGYLDSVPT DPWGNEYQYM NPGEHGDIDI 
YSLGADGSPG GEGVDAEIGN WDVD