| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_2371 |
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| Symbol | |
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| ID | 4709226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 2606091 |
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| End bp | 2607323 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639856846 |
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| Product | general secretion pathway protein F |
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| Protein accession | YP_001003936 |
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| Protein GI | 121999149 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.371859 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGCGT TCGAGTATCA GGCCCTCGAC CCCAACGGAC GCACCCGCTC CGGTGTGCTG
GAAGGCGACA GCGCCCGGCA GATCCGGACG CAGCTGCGCG AGCAGGCCCT CACCCCGCTG
AGCGTCCACG AGGTCGCCGA GCGGGAACAG CGCAGCGCGG CCTCCACCGG GAGCGGCACA
CGCCTGCTGC CACGCCGCGG GGTTCGCGCC GGCGACCTGG CGCTGGTCAC CCGGCAGATG
GCGACCCTGG TCCGCTCCGG GCTGCCGCTG GAGGAGGTGC TTCGCACCGT CTCCCGACAG
ACCGAACGCA AGCGGCTCAA GAGCGTACTG CTGGCCGTGC GCACCCGGGT CACCGAGGGC
CACAGCCTGG CCCAGGCCCT CGGCGACTTC CCGCACATCT TTCCGGACAT CTACCGAACC
TCCGTAGCCG CCGGCGAGCA GTCGGGCCAC CTGGAAGTCG TCCTTGAGCG CCTTGCGGAG
TACGCTGAGA AACGCCAGCA GATGCGCCAG AAGGTGCAGC TGGCCCTCTT CTACCCGATT
CTGCTGACGG TGATGGCGAT CCTCGTCACC GTCGCCCTGC TCGGCTACGT GGTCCCGGAG
GTCATCCAGG TCTTTGACAA CATCGGCCAG GATCTTCCGG CGCTGACCAT TGGTCTCATT
GCCGTGAGCG AGGCGGTTCA GGACTACGGC CCCTACACCG GGATCGGCTT GGGACTGGCC
TTCCTGGCCG GGACACAGTT CCTGCGCCGC CCCGGACCAC GCCGCCGGTG GGATCGACTG
CTCCTGCGCC TGCCGCTGAT CGGGCGCCTG GTGCGCGGCA CCAACACCGC CCGCTTCGCG
CGGACACTGG CGATCGTCTC CGCCTCCGGG GTGCCGATCC TGGAGGGGCT GCGGATCTCC
AGCCAGGTGG TGGGCAACGT GGCCATGCGC GAGGCCATCG ACCAGGCGGC CCGGGAGGTG
CGCGAGGGCG GTTCCCTGGC CCGCTCGCTG GAGCGCAGCG GCTATTTCCC GCCGATGACG
GTACACTTGA TCGCCAGCGG GGAGTCGAGC GGCGACCTCA ACCAGATGCT CGGCCGGGCA
GCCGAGAGCC AGGAGCAGGA GATGGAGACC ACCACCGGTG TGCTCGTTGG CCTCTTTGAG
CCGGCGCTGA TCCTGGTCAT GGGCGGCGTC GTGCTGACCA TCGTCCTCGC CATCCTCCTG
CCGATCTTCG AGATCAACCA GCTTGTTCAG TAG
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| Protein sequence | MPAFEYQALD PNGRTRSGVL EGDSARQIRT QLREQALTPL SVHEVAEREQ RSAASTGSGT
RLLPRRGVRA GDLALVTRQM ATLVRSGLPL EEVLRTVSRQ TERKRLKSVL LAVRTRVTEG
HSLAQALGDF PHIFPDIYRT SVAAGEQSGH LEVVLERLAE YAEKRQQMRQ KVQLALFYPI
LLTVMAILVT VALLGYVVPE VIQVFDNIGQ DLPALTIGLI AVSEAVQDYG PYTGIGLGLA
FLAGTQFLRR PGPRRRWDRL LLRLPLIGRL VRGTNTARFA RTLAIVSASG VPILEGLRIS
SQVVGNVAMR EAIDQAAREV REGGSLARSL ERSGYFPPMT VHLIASGESS GDLNQMLGRA
AESQEQEMET TTGVLVGLFE PALILVMGGV VLTIVLAILL PIFEINQLVQ
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