Gene Hhal_2357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2357 
Symbol 
ID4709092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2584568 
End bp2585392 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content68% 
IMG OID639856832 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001003922 
Protein GI121999135 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.605139 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGCC TGATCAACCG CCACCCCGGC CGGGTCGGGG GCGCCGCCCT GGCGATGCTC 
CCCTTTGTCC TGGCGCTGGT GGCCTACACC ATCGCCTCGT CGCAGCGCCT GGCCGAGAAT
CCCAACGACC CGGTGCTGCC GTCGCTGATC ACGCTGATCG AATCCTTCCT GCGCCTGGCC
ACCGAGGAGA GTCGGCGCAC CGGTGAGGTC CTCCTGTGGT TGGACACCGG TGCCAGCCTC
GGGCGGCTGG GCATGGGCGT GGCCCTGGCC GCCGCCATCG GCCTGCTGGT CGGCATCCTC
AACGGCTGCC TGCCCTACGC GCGGCGTACC TTCTCGCCCT TCGTCACCGC CGTGGCCATG
ATCCCGCCGC TGGCGGTGCT GCCGATCCTG TTCATCGCCT TCGGCGTCGG CGAGCTGGCG
AAGGTGATGC TGATCGTCTT CGGTGTTGCG CCGTTCATCA TGCGCGACCT GCAGCAGCGG
GTCGAAGAGC TGCCGCGTGA GCAGCTGATC AAGGCGCAGA CCCTCGGCGC ATCGACCTGG
CAGATCGTGC TACGGGTGAT CCTGCCGCAG ACCCTGCCCC GGCTGATCGA CGCCACGCGG
CTGAGCCTCG GGGCGGCCTG GCTGTTTCTC ATCGCCTCGG AGGCCATCGC TGCCACTGAG
GGGCTCGGCT ACCGGATCTT CCTGGTCCGG CGCTACCTGG ATATGGAGAC GATCCTCCCC
TACGTGGCGT GGATCACCCT GCTCGCCTTC CTCTTCGATC TGACCCTGCG CGGGGTCAAT
CGCTGGTTCT TCCCCTGGTA CGCCGGAAGG AGCGCCCGTT CATGA
 
Protein sequence
MKRLINRHPG RVGGAALAML PFVLALVAYT IASSQRLAEN PNDPVLPSLI TLIESFLRLA 
TEESRRTGEV LLWLDTGASL GRLGMGVALA AAIGLLVGIL NGCLPYARRT FSPFVTAVAM
IPPLAVLPIL FIAFGVGELA KVMLIVFGVA PFIMRDLQQR VEELPREQLI KAQTLGASTW
QIVLRVILPQ TLPRLIDATR LSLGAAWLFL IASEAIAATE GLGYRIFLVR RYLDMETILP
YVAWITLLAF LFDLTLRGVN RWFFPWYAGR SARS