Gene Hhal_2343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2343 
Symbol 
ID4711321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2568667 
End bp2569533 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content67% 
IMG OID639856818 
Productlipid A biosynthesis acyltransferase 
Protein accessionYP_001003908 
Protein GI121999121 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID[TIGR02207] lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGCTGC TTGCCCTTCT CCCGATTCCG TTGATTGGGC GCATCGGTGA CGGGCTCGGA 
ATGTTGCTGT GGGTTGCCGT CCCGCCGCGA CGGCATATCG TCCGCACGAA TCTTGGGCTC
GCCTTCCCGG ATCGTTCGCT CGCCGAGCGA AGGCGGCTCG AGCGGGCCCA CTTCCGCTCC
GCAGCACGGG GCATGCTTGA GGGGGCTCTG GCCTGGTGGG CATCCATCGA GCGCCTTGCC
CCCTACTACA CCATTGAGGG CCTGGAAAAC ATCGAAGTCG CCCGGCGGGC CGGACGAGGC
GTGATCCTGC TGATGCCGCA CTACACCACC ATGGAGATGT GCGGAAAGAT CATCGGTCAC
CACGTCCCGG ATTTCCACCC CGTCTACAAA CCCACCAAGG ACCCTGCCTT CAACACCGCG
ATGGTGCGCA TCCGGAGCAC CGGGGTCGCG GGGCTGCTGG TCAACGACGA CATGCGGGGG
ATCCTGCGCG TTCTGCGTAA CGGTCAGGTG ATCTGGTACG CACCCGACCA GGACTTCGGA
CGCCGTGGCT GCGTCTTTGC GCCCTTTATG GGCGTAGCCA CCAGCACCCT GACGACGACC
GCGCGCCTGG CTCAGCGCTC AGGCGCTCCG CTCGTGCCGC TGCACTGTGA ACGCTTGCCC
GGGAACCGCT GGCACGTGCG TGCCGACACC CCACTGGAAG GGTTTCCGAG CGGCGATGAC
GAAAAAGATG CAACCCGCAT CAACTCGGTC ATCGAGGCCC AGGTCCGGCA GGCGCCGGAG
CAGTACCTGT GGCTGCACCG CCGCTTCAAG ACGCGCCCCG ACCCCGACGC CCCCAACCCC
TACACCCGGC CAGGGCGCAG GCGCTAG
 
Protein sequence
MRLLALLPIP LIGRIGDGLG MLLWVAVPPR RHIVRTNLGL AFPDRSLAER RRLERAHFRS 
AARGMLEGAL AWWASIERLA PYYTIEGLEN IEVARRAGRG VILLMPHYTT MEMCGKIIGH
HVPDFHPVYK PTKDPAFNTA MVRIRSTGVA GLLVNDDMRG ILRVLRNGQV IWYAPDQDFG
RRGCVFAPFM GVATSTLTTT ARLAQRSGAP LVPLHCERLP GNRWHVRADT PLEGFPSGDD
EKDATRINSV IEAQVRQAPE QYLWLHRRFK TRPDPDAPNP YTRPGRRR