Gene Hhal_2333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2333 
Symbol 
ID4709292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2559351 
End bp2560217 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content73% 
IMG OID639856808 
Producthypothetical protein 
Protein accessionYP_001003898 
Protein GI121999111 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.248827 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCTTTT ATGCGCAACT TTTCAACGAC GCCGCACCAC CCCTTGCGCC GCGCCCGGAT 
CCCGCCGAAA CTCAGCCCGT GCTCGAACTG CTGATCTATC TCGGCGCCGG CTGCCTGGCC
GGCGCGACGG CCGGGCTGTT CGGCGTCGGC GGCGGGATCG TGGTGGTGCC GGTCCTGCTG
CTGGTCTTCG CCGCGCTCGA CTTCGACGCG GCGGTGGCCA CCCACCTGGC CATCGGTACC
TCGCTGGCCA CCGTCGTGGT GACCTCCTTG GGCTCGGCGC GCAGCCACTA CCAGCTCAGC
GCCGTGGATG TGCCCCTGTT CCTGCGTCTC GCGGCCGGGA TGGTCGGCGG GGCGGTGCTG
GGCACGGTGC TGGCCGGCTA CCTGGACGGG GCCGCCCTGC AGCGGCTGTT CGGCAGCTTC
CTGCTGCTGG TCTCGCTGTA CATGCTCTCC GGCTGGCAGC CGCCGCGGCG CGGCGGCGGC
GGAGGCACCG GCGTCCTGGC CGGCGTCGGC GGCGGCATCG GGACGCTGTC GGCCATGGTG
GGGGTCAGCG GCGGCACGGT GACGGTCCCC TACCTGGTCT GGCGCGGCGT AGCCATGCAC
CGGGCTGTGG GGACGTCTTC GGCCACTGCG CTACCGCTGG GCCTGACCGG TGCGCTGGGA
TACTTGATGG TGGGGTGGGG GCACCCGCAG CTGCCGTCGG GTGCCACCGG CTACATTTAC
TGGCCGGCGT TCGCCGGGGT CGTCGCCGCC AGCCTGCTGG CCTCTTCGCT GGCCGCGCGC
CTGGCCCACC GCGTCCCCGC CCGGCAGCTG CGCCGGCTGT TCGCCGCAGT GCTGCTGGTC
GTGGCCCTGC GGCTGCTGCT CAGCTGA
 
Protein sequence
MAFYAQLFND AAPPLAPRPD PAETQPVLEL LIYLGAGCLA GATAGLFGVG GGIVVVPVLL 
LVFAALDFDA AVATHLAIGT SLATVVVTSL GSARSHYQLS AVDVPLFLRL AAGMVGGAVL
GTVLAGYLDG AALQRLFGSF LLLVSLYMLS GWQPPRRGGG GGTGVLAGVG GGIGTLSAMV
GVSGGTVTVP YLVWRGVAMH RAVGTSSATA LPLGLTGALG YLMVGWGHPQ LPSGATGYIY
WPAFAGVVAA SLLASSLAAR LAHRVPARQL RRLFAAVLLV VALRLLLS