Gene Hhal_2307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2307 
Symbol 
ID4709104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2534561 
End bp2535916 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content72% 
IMG OID639856782 
Productpeptidase M16 domain-containing protein 
Protein accessionYP_001003872 
Protein GI121999085 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGTCC TGCATCGATT CGGCGCGGCC GCCGTGGCCA CCGTCATGCT GCTGGCCGGC 
ACTGCACAGG CCGATCCGTT CGGCCCCGAG GTCCAGCGCT GGGAAGGCCG CGAAGGGGCC
GCCGTCTACT TCATCCAGGC GCGCGAGGTA CCGATGGTGG ACATCCAGGT GATCTTTGAC
GCCGGCAGCG CCCGCGACCG CGGCACACCG GGCCTGGCGC TGCTCACCTC GCGCAGCCTG
GACCAGGGGG CCGGTGAGCT CGATGCGGGA GCCCTGGCCC GCCGCCTGGA AGACGTCGGC
GCGCGGCTGA GCACCTCGGC GGGCCGCCAG CAGGCCCAGG TCCACCTGCG CAGCCTCTCC
GACGCCACGG CGCTGGATGC CTCCGTGGAC CTCCTCGAGA AGGTCCTGGC CGTACCGGCC
TTCGACGAGG AGGCGGTCCA GCGGGAGCTG CGACACATGC AGCAGAACCT GCGCGCCGAA
CGCCAGTCGG CCTCGAACAT CGCCCTGCGC GCACTCTACG CCGCGATGTA CGACGATCAC
CCCTACGCCC CCCCGCCGTC GGGCACCGAG GAGGGGCTGG CAGCCCTGGA CGCCTCCCGG
GTCGCCGCCT TCTTCCACGA GCACTACGTC GCCGCCAACG CCAGCATCGC CATCGTGGGG
GACCTGGGGC GCGAGCAGGC CGAGGCACTG GCCGATCGCC TGCTCGGCGC CCTGGAGGGC
GGTGAGCCGG CGCCGGCACT CCCCGAGCCG CCCGCCGAGC CGGCGCAGGA GGAGATCCGC
ATCCGCTTCC CGGGCTCACA GACGGCGCTG ATGATGGGCC TGCCGGCGAT CGCCCGCGGC
GAGGAGGAGC TGGAGTACCC GCTGCGGGTG GCCAACCACG TCCTGGGCGG CGGCGGACTG
GTGTCGCGGC TCTACCAGAG CATGCGCGAG GAGCGCGGGC TCTCCTACGC CTCGTCGTCG
AGCCTGAACA TCATGCCGGT GGGCGGCCCC TGGCTGATCC GCTCCACGGT CGAGGCCGAA
CGGAGCGAGG AAGCTCTGGA GGTGCTGCGA GCCGAGGTCG AGCGCCTCGC ACGCGACGGC
CTGGAGGACG AGGAGATCGA CGCGACCGTT CGCCACCTCA CCGGTTCCTT CCCGCTCAGC
GTGGCGAACA ACTCGGCGCT GGTCGGGCAG CTCAGCGTCA TGGCAGCCAA CCGCCTGCCC
ACCGACCACC TGGCGCGCTA TATACCGCGC ATGGAGGCCG TGGACGCGGC GGCGATCCGC
CGCGCGCTGG ACGAGCGGCT CGACCCGACG CGGATGGTCA CCGTGCTGGT CGGCCCGGAC
CTGGAGAACG CTGACATGGA GATGGATCCA GAGTGA
 
Protein sequence
MGVLHRFGAA AVATVMLLAG TAQADPFGPE VQRWEGREGA AVYFIQAREV PMVDIQVIFD 
AGSARDRGTP GLALLTSRSL DQGAGELDAG ALARRLEDVG ARLSTSAGRQ QAQVHLRSLS
DATALDASVD LLEKVLAVPA FDEEAVQREL RHMQQNLRAE RQSASNIALR ALYAAMYDDH
PYAPPPSGTE EGLAALDASR VAAFFHEHYV AANASIAIVG DLGREQAEAL ADRLLGALEG
GEPAPALPEP PAEPAQEEIR IRFPGSQTAL MMGLPAIARG EEELEYPLRV ANHVLGGGGL
VSRLYQSMRE ERGLSYASSS SLNIMPVGGP WLIRSTVEAE RSEEALEVLR AEVERLARDG
LEDEEIDATV RHLTGSFPLS VANNSALVGQ LSVMAANRLP TDHLARYIPR MEAVDAAAIR
RALDERLDPT RMVTVLVGPD LENADMEMDP E