| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_2302 |
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| Symbol | |
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| ID | 4709107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 2529404 |
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| End bp | 2530267 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639856777 |
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| Product | RNA polymerase, sigma 32 subunit, RpoH |
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| Protein accession | YP_001003867 |
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| Protein GI | 121999080 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.962406 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACGG CACTGGTCAC GGCGGGTAAC GCCAATCTGC CGCTGCCGAC GAGCAGCGAG
GACGCGTATA TCCAGGCAGT GAGCCAGATC CCGGTGCTCG ATGCCGACGA GGAGTACGAG
CTGGCCCGGC GGTGCCAGTA CGAAGGCGAT CTCGACGCCG CCCGGCAGCT GGTGCTCTCG
CATCTGCGTT TCGTCGTCCA CGTGGCTCGG GGGTACCGCG GCTACGGCCT GGCCCTCGGT
GACCTGATCC AGGAAGGCAA TATCGGCCTG ATGAAGGCCG TCAAGCGCTT CGATCCGGAC
GTGGGGGTTC GTCTGGTCTC CTTCGCCGTG CACTGGATCC GCGCCGAGAT CCACGAGTTC
ATCCTGCGCA ACTGGCGCAT CGTCAAGGTG GCCACCACCA AGGCGCAGCG CAAACTGTTC
TTCAACCTGC GTGGCGCCAA GAAGCGCCTG GGCTGGATGA CCCGCGAAGA GGTCAACGCG
GTGGCCGAGG ATCTCGGCGT CCAGCCTGAG ACGGTCCTGG AGATGGAGTC CCGGCTCTCG
GGGCAGGATC TGGGCTTCGA TCCGCTGGTT TCCGAAGAAG ATGAAGAGCA GGCGCGGGCC
CCGGTGGCCT ACCTGGAGGA CCGGCGCTTC GATCCGGCCG AGGTGGTGGA GAGTTCCGAC
TGGGGGACGC ACCAGGACGA TTCGCTGCAC CAGGCGCTCG GTCAGCTGGA CGAGCGCAGT
CAGAACATCC TGCGCGCCCG CTGGCTGGAG GAAGAGCGCC AGACCTTGCA GGAGCTGGCC
GAGCGTTACG GTGTCTCTGC CGAGCGCATC CGCCAGCTCG AGAAGAACGC CATCAGCAAA
CTGCGCGGGG CGGTCAGCGC CTGA
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| Protein sequence | MSTALVTAGN ANLPLPTSSE DAYIQAVSQI PVLDADEEYE LARRCQYEGD LDAARQLVLS
HLRFVVHVAR GYRGYGLALG DLIQEGNIGL MKAVKRFDPD VGVRLVSFAV HWIRAEIHEF
ILRNWRIVKV ATTKAQRKLF FNLRGAKKRL GWMTREEVNA VAEDLGVQPE TVLEMESRLS
GQDLGFDPLV SEEDEEQARA PVAYLEDRRF DPAEVVESSD WGTHQDDSLH QALGQLDERS
QNILRARWLE EERQTLQELA ERYGVSAERI RQLEKNAISK LRGAVSA
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