Gene Hhal_2301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2301 
Symbol 
ID4709432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand+ 
Start bp2528683 
End bp2529357 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content72% 
IMG OID639856776 
ProductDNA repair protein RadC 
Protein accessionYP_001003866 
Protein GI121999079 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGATAC GTTCGTGGCC GCGCGAGGAG CGGCCCCGCG AGCGGCTGAT CCAGCGCGGT 
CCGCAAGCGC TGTCCGACGC CGAGCTGCTC GCCATCTTCC TGCGCACTGG GCGCCGCGGC 
CAGTCCGCGG TGGAGCTGGC CCGGGAACTG TTAGCCGCGT TCAGCGGCCT GCGCGGCCTC 
CTCGAGGCCG ATCGCGAGAC CTTCGCCGCC CGCCCGGGGC TGGGCGACGC CAAGTACGCC 
CAGATGCAGG CGGCCCTGGA GATCGCCCGA CGCCACCTGG GTGAACAGCT GCAGCGGGGC 
CCCACCCTGA GCAGCCCGGC GCAGACCCGG ACGTACCTTG CCGCGCTGCT GCGCGACCAC 
CCCAGCGAGG TCTTCGGCGG GCTGTTCCTG GACAACCGCC ACCGAGTGAT CGGCTTCGAG 
GAACTCTTCC GCGGGACCAT CAACGGCGCC AGCGTCTATC CGCGAGAACT GGTGCGCCGC 
GCCCTGGCCC ACAATGCAGC CGCGGTGATT GTGGCCCACA ACCACCCCTC CGGCATCACG 
GAACCGAGTG CTGCGGACGA GGCCCTGACC CACCGCCTGC GCGAGGCCCT GGGACTGGTC 
GACGTCCGTC TGCTGGATCA CTTCGTGGTG GGCGACGGCG AGCCGGTGTC ACTCGCCGAG 
CGGGGGGTCC TGTAG
 
Protein sequence
MSIRSWPREE RPRERLIQRG PQALSDAELL AIFLRTGRRG QSAVELAREL LAAFSGLRGL 
LEADRETFAA RPGLGDAKYA QMQAALEIAR RHLGEQLQRG PTLSSPAQTR TYLAALLRDH 
PSEVFGGLFL DNRHRVIGFE ELFRGTINGA SVYPRELVRR ALAHNAAAVI VAHNHPSGIT 
EPSAADEALT HRLREALGLV DVRLLDHFVV GDGEPVSLAE RGVL